Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02408 ATGACAACATTTATGGACATGTACAACACTACTAGTAGCATCATGACACCGGATTTCTTAGACCAGTGTAGTGATCAAGAGCTGATGAAAGCACTTGAGCCTTTTATGAAAAGTGATTCATCTAGCACTACTTCCTCATCAATAACAACATACCCTTCATTCTCTTCTTTTTCTTCTTCTCCCAACTTGTCCTCAACAACATGGAGCACCCAATTTTGCTCCTCAAGCTACCACCAAAAGGGTCCAACTCCAACCCAAGCTAGTTCCTTCAAACTGAACCAACTCACCCCATCACAAATATTTCAAATTCAAGCCCAAATCCAGGTTCCACGAGCCCAGTTTCTCAGCCCAAAGCCCATTACCATGAAGCACGTGCGGGCTTCTTGTTCTAATTCAAAGGCCACGAAGCTTTACCGTGGGGTGAGGCAGAGACACTGGGGCAAGTGGGTCGCTGAGATCAGACTCCCTAAGAACCGCACACGTCTCTGGCTCGGTACATTTGAAACCGCAGAGGAAGCAGCTTTGGCTTACGACAACGCAGCGTTTAAGCTAAGAGGAGAAAACGCGAGGCTCAACTTCCCTCACCTACGTCACCATGGAGCGCGTGTGTACGGTGAGTTTGGGAACTACAAGCCTCTCCCTTCTGCGGTTGATGCGAAGCTCCAAGCCATTTGTCAAAGCTTAGGGACCAAATTGCAGAAACTGAAAACTGATCAAAACCCTGTTGTAGATGCAAAGGTTAAGAAGACATCGGAGTTCGAGGATTTTAAGATTGAGAACCAAACATCATCATCCTCGGCGTTGTCGGATGAATATTCTTCTTCTTCTTCTTCGCCCGAATCCGATATTACTTTCTTGGATTTCTCGGATTCTTGTGAAACAACATGCAATCTTGGGTTGGACTTGGAAAAGTACCCTTCCGTGGAGATTGATTGGGCAGCTTTATCTGAGTCATGA 957 0.4598 MTTFMDMYNTTSSIMTPDFLDQCSDQELMKALEPFMKSDSSSTTSSSITTYPSFSSFSSSPNLSSTTWSTQFCSSSYHQKGPTPTQASSFKLNQLTPSQIFQIQAQIQVPRAQFLSPKPITMKHVRASCSNSKATKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFETAEEAALAYDNAAFKLRGENARLNFPHLRHHGARVYGEFGNYKPLPSAVDAKLQAICQSLGTKLQKLKTDQNPVVDAKVKKTSEFEDFKIENQTSSSSALSDEYSSSSSSPESDITFLDFSDSCETTCNLGLDLEKYPSVEIDWAALSES 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02408 318 SMART rav1_2 137 200 IPR001471 GO:0003700|GO:0006355
Gma11g02408 318 ProSiteProfiles AP2/ERF domain profile. 137 194 IPR001471 GO:0003700|GO:0006355
Gma11g02408 318 PRINTS Ethylene responsive element binding protein signature 138 149 IPR001471 GO:0003700|GO:0006355
Gma11g02408 318 PRINTS Ethylene responsive element binding protein signature 160 176 IPR001471 GO:0003700|GO:0006355
Gma11g02408 318 SUPERFAMILY DNA-binding domain 137 195 IPR016177 GO:0003677
Gma11g02408 318 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 314 - -
Gma11g02408 318 Gene3D AP2/ERF domain 137 195 IPR036955 GO:0003700|GO:0006355
Gma11g02408 318 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 1 314 - -
Gma11g02408 318 CDD AP2 136 196 IPR001471 GO:0003700|GO:0006355
Gma11g02408 318 Pfam AP2 domain 138 187 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02408 Gma-Chr11 39447281 39448900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02408 1 315 AP2-EREBP Transcription Factor Family AT1G78080 46.199 4.12e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma11g02408 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02408 K09286 - gmx:100815162 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00167 18 1356193 1357756 Gma11g02408 11 39447281 39448900 GST