Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02401 ATGCGTTGGAGCTCTACTAACTCAGAGGTGGTTGCTTCAAACAAAACCACGTTAGGAGAGATTTTGGACATTGAGAAAAACATGGCTAAGTGGGTGCTCAATGCTCCAGAGCCACCTTCCATGCTGCGTCAGGTCGTGGACAACGTCAAGGACACCCTCTTGCCACATCCAAATCCAAAGACATTCTCTTATCTCAGGAACCAACCCTTTTCCAAACGTGCCTTTGCCTTGTTGCAAGACTTGTTTCCCATTCTTCCTTCACTCCATAACTACAATGCCCAAAAGTTCAAGTGCGATTTCATGGCCGGTCTAACCCTTGCAATCTTCGCTATTCCTCAGTGTATGGGAAATGCGACATTGGCGCGGCTAAGTCCTGAATATGGCCTCTatacaggaattgtcccacctcttatttatgCCATGCTGGCGAGTTCAAGGGAGATAGTGATCGGACCTGGATCTGTGGATTCACTGCTACTTTCCTCAATGATCCAGACATTGAAAGTTCCTATTCATGATTCTATTACTTACAACCAACTTGTTTTCACTGTGACTTTTTTTGCGGGCATCTTTCAAGTTGCTTTCGGGCTCTTTAGGTTTGGTTTTCTGGTGGAATATCTTTCAGATCCCACGATCGTGGGGTTCTTGGCAGCAGCTGCCGTGAGCATTGGGCTACAACAATTGAAAGGATTATTTGGGATCGTTAACTTTACCAACAAAACTGGTTTATTTTCCGTGGTCAAATCTCTTTGGACATCGTTCAAAAACCAATCAGCCTGGCATCCCTACAATTTAATTATTGGATTCTCATTTCTCTGTTTCATCCTATTTACCAGATTCCTGGGCAAAAGGAACAAGAAACTGATGTGGTTGTCACACGTTGCTCCTCTCCTTTCTGTTATTGTATCCTCTGTTGTTGCATACAAAATAAACTTTAACGAGCTTCAAGTGAAGGACTACAAAGTTGAAGTCTTGGGACCAATTAAAGGGGGCAGCTcgaatccaagctcactccatcagttaacatttgatagccaagttgtgggtcatttgatcagaatAGGGCTCACCATTGCTATTATTTCACTCACGGGATCTATTGCTGTTGGCCGATCATTTGCATCTCTAAAAGGACACAGTATTGATCCCAACAGAGAAGTGGTGTCCTTGGGCATAATGAACATTGTTGGATCCTTAACTTCTTGCTATATTGCATCAGGATCTTTGTCACGTACTGCTGTAAACTACAATGCTGGCTCTGAAACAATGGTGTCGAACATAGTGATGGCACTGACGGTTCTCATGTCACTTAAATTTTTGACGGGGCTTTTGTATTTCACTCCGAAAGCAATCCTTGCAGCAATAATTCTCTCGGCCGTACCGGGACTGATTGACCTTAACAAAGCACGTGAAATTTGGAATGTTGATAAAATGGATTTCCTTGCTTGCACTGGAGCCTTTTTGGGAGTCTTGTTTGCATCTGCAGAAATAGGCCTTGCAATTGGGATCACGATATCATTTGCGAAGATAATTATAACCTCAATTCAACCTGCTACAGCGGTTATTGGAAGGCTTCCAGGAACGGATGCATTCGGCGATGTTGAACAATATCCAATGGCGGTTAACATTCCTGGGGTTTTGATAGTCTCTTTAAAATCTTCTTGGCTTTGTTTTGCAAATGCAAATCTTGTGGAGGAAAGGATTGAGAGATGGGTGAACAATGCAAAAGCTAAGGAAGGAAGAGAAAGCACCTTCACATACGTCATTATTGATGCCTCAAGTCTTACGAATATTGACACCGCGGGAATAGCTTCTCTGGTGGAGCTCAACAAAAATCTGATTTCACGGGGAGTAAAGTTAGCTATCGCTAACCCTAGGTGGCATGTAATTCACAAGCTAAGATTAGCTAACTTCGTGAGCAAAATTGGAGGAAGGATTTTCCTTTCTGTGGGAGAAGCAGTAGATGCATGTGTTGGCACTAAAATAATGGTTGTTGTATAA 2001 0.4098 MRWSSTNSEVVASNKTTLGEILDIEKNMAKWVLNAPEPPSMLRQVVDNVKDTLLPHPNPKTFSYLRNQPFSKRAFALLQDLFPILPSLHNYNAQKFKCDFMAGLTLAIFAIPQCMGNATLARLSPEYGLYTGIVPPLIYAMLASSREIVIGPGSVDSLLLSSMIQTLKVPIHDSITYNQLVFTVTFFAGIFQVAFGLFRFGFLVEYLSDPTIVGFLAAAAVSIGLQQLKGLFGIVNFTNKTGLFSVVKSLWTSFKNQSAWHPYNLIIGFSFLCFILFTRFLGKRNKKLMWLSHVAPLLSVIVSSVVAYKINFNELQVKDYKVEVLGPIKGGSSNPSSLHQLTFDSQVVGHLIRIGLTIAIISLTGSIAVGRSFASLKGHSIDPNREVVSLGIMNIVGSLTSCYIASGSLSRTAVNYNAGSETMVSNIVMALTVLMSLKFLTGLLYFTPKAILAAIILSAVPGLIDLNKAREIWNVDKMDFLACTGAFLGVLFASAEIGLAIGITISFAKIIITSIQPATAVIGRLPGTDAFGDVEQYPMAVNIPGVLIVSLKSSWLCFANANLVEERIERWVNNAKAKEGRESTFTYVIIDASSLTNIDTAGIASLVELNKNLISRGVKLAIANPRWHVIHKLRLANFVSKIGGRIFLSVGEAVDACVGTKIMVVV 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02401 666 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Gma11g02401 666 Gene3D STAS domain 516 659 IPR036513 -
Gma11g02401 666 ProSiteProfiles STAS domain profile. 556 657 IPR002645 -
Gma11g02401 666 Pfam Sulfate permease family 96 484 IPR011547 GO:0016021
Gma11g02401 666 SUPERFAMILY SpoIIaa-like 543 657 IPR036513 -
Gma11g02401 666 PANTHER SULFATE TRANSPORTER 16 664 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma11g02401 666 CDD STAS_SulP_like_sulfate_transporter 537 648 - -
Gma11g02401 666 PANTHER EARLY NODULIN-70 16 664 - -
Gma11g02401 666 TIGRFAM sulP: sulfate permease 83 650 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma11g02401 666 Pfam STAS domain 537 653 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02401 Gma-Chr11 39386695 39394129 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02401 25 662 Inorganic Solute Cotransporters AT5G10180 54.037 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02401 K17469 - gmx:100817841 1296.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00173 18 1419649 1427308 Gma11g02401 11 39386695 39394129 GST