Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02395 ATGAGCGGTGGCCGGAGACGTGACGGGAGAGACAGCAGAGCATTGAAGAAGCGGAAGCTGAACCGCACTCCCGAGGAAGAGCTCGAGGCAAAATTTGGATTCGATCTCTTCACAGAAGGCGAAAAGCGTCTCGGATGGTTACTGACTTATGCATCCTCTTCTGTTGACGATGAAGACGGTTACAAAGTATACAGTTGCGTTGATCTCTACTTTGTTGCGCAGGATGGCTCTTCATTCAAGACAAAATTCAGATTTCGGCCTTATTTCTATGTAGCTACAAAGGATAAAATGGAGATTGATGTTGAAGCATACCTGAAAAGACGTTATGAAGGTCAGATTGCAGATGTTGAAATTATAGAGAAAGAAGACCTGGATCTTAAAAACCATTTATCTGGGTTAAGAAAATCTTATTTAAAGCTTTCATTTGATACTGTGCAACAATTGATGGATGTGAAGAGAGACCTGATGCCTACTGTTGAAAGAAATAAGGTCAAGTCTGATGCTGCAGAAGCCTTTTTGTCTATGTCAACAGAAAGAAGCAGAGAACAAAGACCTCAGGATTTTCTAGATTGCATAACCGATCTTCGTGAATATGATGTTCCTTATCATGTTCGCTTTGCCATTGACAATGATATACGGTGTGGCCAGTGGTATGATGTTGGAGTGCCCACTAATAATGGGGTTACACTTGAGAAGAAGACAGATCTTCTGCAGCGTGCTGAAGTTCGTATTTGTGCATTTGACATTGAGACCACAAAACTTCCATTAAAATTTCCTGATGCTGACTATGATTTAATTATGATGATTTCATACATGGTAGATGGTCAAGGGTATTTAATCATAAATAGAGAGTGTGTCGGGGATGATATAGAGGATATAGAGTACACTCCAAAACCAGAGTTTGAAGGGTGTTTTAAGGTGACAAATGTTCAAAATGAGATTGAGCTTCTTAGATTATGGTTTTCTCATATGCAAGATGTGAAACCTGGTATCTATGTGACATATAACGGCGATTTCTTTGATTGGCCATTCCTGGAACGAAGGGCAACCCATCATGGGTTCAAAATGAGTGATGAATTGGGATTCAAATGCGATACGAATCAAGGGGAATGTCGTGCTAGATATGCTTGCCATTTAGATTGTTTTGCTTGGGTTAAACGTGATAGTTATCTCCCTCAGGGCAGCCAAGGCCTGAAGGCTGTTACAAAAGCAAAGTTGGGTTATGATCCATTGGAGGTGAACCCTGAGGACATGGTTTGCTTTGCAAAGGAAAAGCCACAGATGATGGCCTCCTATTCTGTTTCTGACGCAGTGGCAACTTATTACTTATATACAACTTATGTTCATCCCTTTATTTTCTCTCTTGCAACCATTATACCCATGTCACCAGATGAGGTTTTGCGCAAAGGTAGTGGAACCCTCTGTGAAATGTTGCTTATGGTGCAGGCATACAAGGCTAATGTTATATGTCCTAACAAACACCAATCTGATCCAGAGAAGTTTTATAACAATCATCTTCTTGAGAGTGAGACGTACATTGGTGGTCATGTGGAGTGTCTTGAAAGTGGTGTATTCAGATCTGATATTCCATCTAGTTTTAAACTCGAGCCATCCGCCTATCAGCAACTTATCAACAACCTTGATCGAGATCTACAGTATGCTATAACAGTGGAGGGTAAGATGGATTTGGAATTTGTTTCTAATTATGATGAAGTAAAGAATGCAATCATGGAAAAGCTTGTAAAATTACGAGAAGCACCAATACGTGAAGAATGTCCCCTCATTTATCATCTGGATGTAGCTGCTATGTATCCAAACATAATTTTAACAAACCGACTTCAGCCACCGTCAATTGTTACGGAGGAAGTTTGCACTGCATGTGATTTTAATCGTCCCGGAAAGACTTGCCTACGCAAACTTGAGTGGGTTTGGCGTGGAGAAACATTCATGGCTAAGAAAAGTGACTATTATGCTTTAAAGACACAGATTGAATCAGAGTTTGTTGATGATTCTGAGAAGAACAACAGAGCCTTATCTCACTATTCTGAGAAATCATCAAAATCTTTTCTTGACCTTCCCAAGGCAGAGCAACAATCAAGACTGAAAGAGCGTTTAAAGAAATATTGCCAGAAGGCATATAAACGGGTACTTGACAAACCTGTTACCGAACTTCGTGAAGCAGGAATCTGCATGCGTGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTCCGGGATAGAAGATATGAATATAAAGGTCTCAATAAGGTTTGGAAGGGAAAACTGTCAGAGGCCAAGGCTAGTGGAAATTCTATAAAGATCCAGGAAGCACAGGATATGGTTGTGCTTTATGATTCATTGCAACTTGCTCACAAGTGTATACTTAATTCCTTTTATGGATACGTCATGCGCAAGGGTGCAAGATGGTACTCCATGGAAATGGCTGGAGTAGTGACATATACTGGTGCAAAAATCATTCAGAATGCTCGCTTGCTAGTAGAGAAAATAGGAAAACCACTTGAACTAGACACTGATGGTATCTGGTGTGCACTACCTGGATCTTTTCCAGAAAATTTCACTTTTAAAACAAGAGACCCAAAGAAGAAGTTTACAATCTCATACCCATGTGTTATGCTTAATGTTGATGTGGCAATAAATAACTCAAATGATCAATACCAGACACTCACAGATCCAATCAGGAAAACGTATACAACTCGCAGTGAATGCTCTATCGAATTTGAGGTGGACGGACCGTACAAGGCAATGATCCTTCCCGCTTCCAAGGAAGAAGGAATTTTAATTAAGAAGCGATATGCCGTTTTTAATGATGATGGAACCCTTGCAGAGCTTAAAGGTTTTGAGATCAAACGCAGAGGTGAACTGAAGCTAATAAAAGTTTTCCAGGCTGAACTTTTTGACAAGTTTCTCCATGGTTCAACTTTAGAGGAATGCTATTCAGCTGTTGCTTCGGTGGCAAATGGCTGGCTTGATCTTCTTGATAACCAGGGAAAGGATATTGCAGACAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAATCTTTCGCTGATTATGGTCTGCAGAAGTCTTGTGCTGTTGCCACTGCTAGACGTCTGGCTGACTTTCTTGGCGATACAATGGTCAAAGATAAAGGTCTTCGATGTCAGTACATAGTAGCAAGTGAACCCAAGGGCACGCCAGTAAGTGAGCGTGCTGTTCCTGTGGCAATATTTGAAACTGATGCTGAGGTAATGAAGTTCTATGTCCGAAAATGGTGCAAGGTCTCATCAGATGTTGACATTCGATCCATAATTGACTGGTCCTATTACAAGCAGCGGCTTAGTTCTGCAATTCAAAAAATTATCACTATTCCTGCTGCAATGCAAAAGGTTGCAAATCCCGTCCCTAGGGTGGTTCATCCTGATTGGTTGCATAAGAAGGTCCGTGAGAAGGAGGACAAGTTTCGCCAACGGAAATTAGTTGATGCCTTTAAATCAATGAATAGGAATGAGCACTCAAAAAAGCATAATGACTCAAATCGTGTCCCTCTTGTGATTGATGATGATATTGTTAATGAGTTGGAGGACTTTGGAAACAAGGACAGGAGTTCTACATGCAGGCCTAGACCAATTATACGGCATTATGAAGCTAATAATGAACGACATTCAGGGAAGCTCAATGATCAAGATGTAGAGCAACAGCATAATAAACCATTACAACAAAAAGTTGACAAAAATGTAGATTATGAAGGATGGCTTCAAATAAAGAAGCAAACGTGGAAAGATATTCTGGAAAGGAGAAAGAAGCGAAGATTGGAGAATTCAAAGAAATCTGACCGTGTAAATGGTGTTCTTCAACAAATGAATGGTAAGGGGAATCAGGGCAGAAGTCATGTCAGTTCATATCTTAAAAGGCTTGAGGTAGACTTAACAAAGCGTCACTGGCAGATAATACAACTAGTTCCCAGTTCACTGATAGGCCACTTTTTTGCTTGGGTTGTTGTTGATGGGAGTATGCATAAGATTCCTGTTTCTGTTCCTAGAGTCTTTTACCTCAATTCAAGATCAGACATTACTGAAGAATTTATGGGTAAACGTGTTAACAAGACTCTTCCTCATGGACGGCATAGTTATAACTTGTATGAGGTCTCAATTAATGAAATTCAATATGGGGAAGCAAGCAAAAAACTTGCAGCTCTTCTAGCAGATCCTGATGTTGAGGGAGTATATGAAACTAAGGTGCCACTGGAATTTAATGCAATTGTCCAGCTTGGTTGTGTATGTAAGGTGGACAAAACTGCTAATAAACGTAGTCTACAAGAACCATGGAATTTGAGTGAATTGCACATGAAGACCACAGTTGAATGCGCTTATCTTGAACAATCTATATCCTTCTTTTATTTTTACCATAGCATCTCTGAGGGACGGGCTATATATGTTGGATATTTTCCTGCATTAAAAGCAATAACTGTTGTGGTAGTTAATCCCTATCAAAACAAAGATTTATCACCGACTTTTCTTGAAAGACAATTTCACGATGCTTGCCAGTCTTTGTCTATTGATTCACCTCCGAGGAATGGCATTAATTTCAAGTTGGACTATGTTGCACATGTCAAGGATGCTGAAGCAGTGATGCAAAGAGCAATAAATGGTCACAGTCATGGGAGGGAAAATCACATGCCTATGGTTGCTGTCATTGAATGCCCAAATGTTCAATTAGTAAAATTGGGCATCCAAGTTCTGGATAATTTTCCATGCCTGAGTGTTCCTTATAATGCACGTGATAGTCAGTACCAGATTCTTGGCTGGCAACAAGTTGCTGCTAAACTGGAATGCAACGTTGTGCTGCATCAGTCCAATGGCTAA 4875 0.4018 MSGGRRRDGRDSRALKKRKLNRTPEEELEAKFGFDLFTEGEKRLGWLLTYASSSVDDEDGYKVYSCVDLYFVAQDGSSFKTKFRFRPYFYVATKDKMEIDVEAYLKRRYEGQIADVEIIEKEDLDLKNHLSGLRKSYLKLSFDTVQQLMDVKRDLMPTVERNKVKSDAAEAFLSMSTERSREQRPQDFLDCITDLREYDVPYHVRFAIDNDIRCGQWYDVGVPTNNGVTLEKKTDLLQRAEVRICAFDIETTKLPLKFPDADYDLIMMISYMVDGQGYLIINRECVGDDIEDIEYTPKPEFEGCFKVTNVQNEIELLRLWFSHMQDVKPGIYVTYNGDFFDWPFLERRATHHGFKMSDELGFKCDTNQGECRARYACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVCFAKEKPQMMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYNNHLLESETYIGGHVECLESGVFRSDIPSSFKLEPSAYQQLINNLDRDLQYAITVEGKMDLEFVSNYDEVKNAIMEKLVKLREAPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTEEVCTACDFNRPGKTCLRKLEWVWRGETFMAKKSDYYALKTQIESEFVDDSEKNNRALSHYSEKSSKSFLDLPKAEQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTRDPKKKFTISYPCVMLNVDVAINNSNDQYQTLTDPIRKTYTTRSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVASVANGWLDLLDNQGKDIADSELLDYISESSTMSKSFADYGLQKSCAVATARRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAVPVAIFETDAEVMKFYVRKWCKVSSDVDIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKEDKFRQRKLVDAFKSMNRNEHSKKHNDSNRVPLVIDDDIVNELEDFGNKDRSSTCRPRPIIRHYEANNERHSGKLNDQDVEQQHNKPLQQKVDKNVDYEGWLQIKKQTWKDILERRKKRRLENSKKSDRVNGVLQQMNGKGNQGRSHVSSYLKRLEVDLTKRHWQIIQLVPSSLIGHFFAWVVVDGSMHKIPVSVPRVFYLNSRSDITEEFMGKRVNKTLPHGRHSYNLYEVSINEIQYGEASKKLAALLADPDVEGVYETKVPLEFNAIVQLGCVCKVDKTANKRSLQEPWNLSELHMKTTVECAYLEQSISFFYFYHSISEGRAIYVGYFPALKAITVVVVNPYQNKDLSPTFLERQFHDACQSLSIDSPPRNGINFKLDYVAHVKDAEAVMQRAINGHSHGRENHMPMVAVIECPNVQLVKLGIQVLDNFPCLSVPYNARDSQYQILGWQQVAAKLECNVVLHQSNG 1624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02395 1624 MobiDBLite consensus disorder prediction 1 25 - -
Gma11g02395 1624 CDD POLBc_epsilon 504 1133 - -
Gma11g02395 1624 Gene3D - 952 1136 IPR042087 -
Gma11g02395 1624 CDD DNA_polB_epsilon_exo 241 444 - -
Gma11g02395 1624 SMART polmehr3 240 853 IPR006172 GO:0000166|GO:0003676|GO:0003887
Gma11g02395 1624 Gene3D - 239 469 IPR036397 GO:0003676
Gma11g02395 1624 Gene3D Palm domain of DNA polymerase 765 948 IPR023211 -
Gma11g02395 1624 Gene3D DNA Polymerase, chain B, domain 1 48 226 - -
Gma11g02395 1624 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 29 1621 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Gma11g02395 1624 SUPERFAMILY DNA/RNA polymerases 470 1150 IPR043502 -
Gma11g02395 1624 Pfam Domain of unknown function (DUF1744) 1526 1619 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Gma11g02395 1624 Pfam DNA polymerase family B 769 1081 IPR006134 GO:0000166|GO:0003677
Gma11g02395 1624 Pfam DNA polymerase family B, exonuclease domain 73 401 IPR006133 -
Gma11g02395 1624 SUPERFAMILY Ribonuclease H-like 62 491 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02395 Gma-Chr11 39304635 39327929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02395 1 1613 Core DNA Replication Machinery Family AT1G08260 73.704 0.0 2449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02395 K02324 - gmx:100778115 3253.77