Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02383 ATGAATTCAGCATCCCCGCAGTTTGTTTCCCCGAGAAGTATGAGTGTGTACGATCCGATCCACCAGATTAGTATGTGGGGAGAAGGCTTCAAAAGTAATGGAAATTTAAGTGCAGCCATGCCTTTAATTGATGAGGCAGACATGAAGTTTGATAGTCAGTCAGAGGATGCTTCTCATGGTATACTGGGAGAACCTAATAAGTATGACCAAGAAGCTAGCAAACCTACTGATAAGATACAAAGACGTCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGCCGATTGAGGAAAAAGGCCTATGTGCAGCAGTTAGAATCAAGTCGTTTGAAGTTGATGCAGTTGGAGCAAGAACTTGAACGTGCAAGACAGCAGGGAATGTATATAGGTGGTGGGTTGGATTCTAATCATCTGGGTTTTGCTGGATCAGTAAATTCAGTTGCAGGAATTACAACCTTTGAGATGGAGTATGGACACTGGGTGAATGAGCAAAATAGACAAATCACAGAACTGAGAAATGCTTTAAATGCTCATATTGGTGACGTAGAGCTCAGGATTTTAGTAGATGGTATGATGAGCCACTATGCCGAAATGTTTCGCATGAAATCTGCTGCTGCAAAAGCAGATGTTTTCTATGTTATGTCCGGTATGTGGAAAACAACAGCTGAAAGATTTTTCCTGTGGATTGGAGGCTTTCACCCCTCGGAGCTTCTAAAGGTTCTTGGTCCCCTGATTGAACCCCTGACGGAGCAACAGCGTTTGAATATCTATAACCTTGGACAATCATGTCAGCAAGCAGAAGATGCCCTTTCACAAGGTATGGACAAACTCCGCCAAACACTTGCTGATAGTGTAGCAGCTGGGCAGTTCATGGAAGGAACGTATATTCCACAGATGACTTCTGCAATGGAGAAGTTGGAAGATCTGGTGAGCTTTGTGAAACAGGCTGACCATCTTCGGCAAGAAACCTTGGAGCAAATGTCTCGAATACTTACAATCCGTCAGGCGGCTCGATGCTTGCTTGCTTTGGGGGAATATTTCCAACGCCTGAGGGCTTTGAGCTCACTGTGGTCTAATAGACCCCGGGAACCTGCTTAG 1095 0.4466 MNSASPQFVSPRSMSVYDPIHQISMWGEGFKSNGNLSAAMPLIDEADMKFDSQSEDASHGILGEPNKYDQEASKPTDKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLMQLEQELERARQQGMYIGGGLDSNHLGFAGSVNSVAGITTFEMEYGHWVNEQNRQITELRNALNAHIGDVELRILVDGMMSHYAEMFRMKSAAAKADVFYVMSGMWKTTAERFFLWIGGFHPSELLKVLGPLIEPLTEQQRLNIYNLGQSCQQAEDALSQGMDKLRQTLADSVAAGQFMEGTYIPQMTSAMEKLEDLVSFVKQADHLRQETLEQMSRILTIRQAARCLLALGEYFQRLRALSSLWSNRPREPA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02383 364 Coils Coil 97 124 - -
Gma11g02383 364 ProSiteProfiles DOG1 domain profile. 149 359 IPR025422 GO:0006351|GO:0043565
Gma11g02383 364 SUPERFAMILY Leucine zipper domain 78 120 IPR046347 GO:0003700|GO:0006355
Gma11g02383 364 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 120 IPR004827 GO:0003700|GO:0006355
Gma11g02383 364 CDD bZIP_HBP1b-like 78 130 - -
Gma11g02383 364 Gene3D - 77 126 - -
Gma11g02383 364 SMART brlzneu 74 134 IPR004827 GO:0003700|GO:0006355
Gma11g02383 364 Pfam bZIP transcription factor 76 112 IPR004827 GO:0003700|GO:0006355
Gma11g02383 364 Pfam Seed dormancy control 166 240 IPR025422 GO:0006351|GO:0043565
Gma11g02383 364 Coils Coil 160 180 - -
Gma11g02383 364 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Gma11g02383 364 PANTHER TRANSCRIPTION FACTOR TGA1 1 363 - -
Gma11g02383 364 PANTHER TRANSCRIPTION FACTOR TGA9 1 363 - -
Gma11g02383 364 MobiDBLite consensus disorder prediction 51 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02383 Gma-Chr11 39204045 39209870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02383 1 364 Calmodulin-binding Proteins AT5G10030 68.852 0.0 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma11g02383 DOG1 4.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02383 K14431 - gmx:548066 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00192 18 1557890 1563668 Gma11g02383 11 39204045 39209870 GST
Gma05g01802 05 39624472 39631235 Gma11g02383 11 39204045 39209870 PCT
Gma08g01292 08 10961012 10968014 Gma11g02383 11 39204045 39209870 PCT