Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02371 ATGGATTGTTGTGTGTGTACAACTATGCCATTGATATTAAGGCCTCCGAGGAATACAATATGTGGGGCTTGTTACGAAGGAGTTAGGAGCATAATCAACATGATGAGCAATGTTGAAAGTGAGAAAGTAAAGGCAATGGCTAATCCAAATCAAAATAGTTCTCCAGTTTCGCGGCGAAATTCGATAATTACAAAGGGCAAAAGGGGTAATAACATTGAGATTATTTATCCTCTGCAGATACTTGATGATTGTATTAGATGGTGTTCAGAACAGACGGAGCAGTTTAATCAACAAAAAGAAGACATGGTTTTCCTCAGAGGCTTTGTTGCAGCCTTCAAAGCACAGATTCACACGGATATATTGGTCAGTCCAGGCAGGAACGGTCCACCTATACCTGCACATAAGTCCGTTTTGGCAGCAAGATCAGAAATATTTAAGAACATGCTAGAGTGCGATGAATGCAAGGCAGCACCAAGTAACGCCATAACTATACCCGATTTGAACCATGAAGAACTAGAGTCTCTCCTTGAGTTTCTGTACAGTGGGACATTGAATGTGGAAAAATTGGAGAAACATGTCTACGCTTTGTCACAAGCAGCTGATAAGTATGTGATTCCACATTTGCTGAAACACTGCGAACGATATCTGCTGAGTTCACTAAGCACTTCCAATGCTCTTGAGACACTAGAAATTGCGGATACTTGTTCCAACCACAACTTGAAGGAGACAACCTTGAACTTCTTAGTTAAAAACATTGAGCACATGGTGTCCTCACCTAAATTTGAAGCTTTTGTCCATAGGAGCCCACATCTTACTGTGCAACTAGTTACAAGGGCGTTTGTGAATGGTGCCAAATAA 858 0.4103 MDCCVCTTMPLILRPPRNTICGACYEGVRSIINMMSNVESEKVKAMANPNQNSSPVSRRNSIITKGKRGNNIEIIYPLQILDDCIRWCSEQTEQFNQQKEDMVFLRGFVAAFKAQIHTDILVSPGRNGPPIPAHKSVLAARSEIFKNMLECDECKAAPSNAITIPDLNHEELESLLEFLYSGTLNVEKLEKHVYALSQAADKYVIPHLLKHCERYLLSSLSTSNALETLEIADTCSNHNLKETTLNFLVKNIEHMVSSPKFEAFVHRSPHLTVQLVTRAFVNGAK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02371 285 Pfam BTB/POZ domain 117 219 IPR000210 GO:0005515
Gma11g02371 285 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED 1 284 - -
Gma11g02371 285 Gene3D Potassium Channel Kv1.1; Chain A 86 221 IPR011333 -
Gma11g02371 285 Gene3D - 222 283 - -
Gma11g02371 285 ProSiteProfiles BTB domain profile. 118 188 IPR000210 GO:0005515
Gma11g02371 285 CDD BACK 221 261 - -
Gma11g02371 285 SUPERFAMILY POZ domain 104 219 IPR011333 -
Gma11g02371 285 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 1 284 IPR044784 -
Gma11g02371 285 SMART BTB_4 118 220 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02371 Gma-Chr11 39089412 39091462 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gma11g02371 BTB 2.4e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02371 K10523 - gmx:100814664 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02371 11 39089412 39091462 Gma11g02371 11 39089412 39091462 ECH
Gma18g00204 18 1646228 1648066 Gma11g02371 11 39089412 39091462 GST