Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02370 ATGGTTTCTAGAGAGCAAAAAAGAGCAGCACTGCATGAGAAGCTGCAACTTCTTCGTTCTATAACCAACTCTCATGCTCTAAACAAAACCTCGATCATAATAGATGCATCAAAGTATATCGAAGAGTTAAAGCAAAAAGTAGAAAGACTGAATCAACACGTAGCCAATGCACAAACTTCAAGTGACCAAAATACTTTGCCTATGGTTACAGTAGAAACCTTAGAGAAGGGGTTTCTTATAAATGTTTATTCAGCAAAGACCTGCCCTGGTTTACTTGTTTCCATATTGGAGTCATTTGAAGAGATTGGTCTTAATGTGCTTGAAGCTAGGGTTACTTGTACGGACACCTTTCGATTTCATGCTGTTGGAGGAAAAAATGAAGAACAAGGTGATGAGGGTATTGATGCACAAACTGTGAAACAGGAATTGGGACAAGCAATAAAGAACTGGAGCCAAAATGCTGACCAAaagtaa 474 0.384 MVSREQKRAALHEKLQLLRSITNSHALNKTSIIIDASKYIEELKQKVERLNQHVANAQTSSDQNTLPMVTVETLEKGFLINVYSAKTCPGLLVSILESFEEIGLNVLEARVTCTDTFRFHAVGGKNEEQGDEGIDAQTVKQELGQAIKNWSQNADQK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02370 157 PANTHER TRANSCRIPTION FACTOR SCREAM-LIKE PROTEIN 1 155 - -
Gma11g02370 157 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 155 - -
Gma11g02370 157 CDD ACT_UUR-ACR-like 89 147 - -
Gma11g02370 157 Coils Coil 33 60 - -
Gma11g02370 157 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 64 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02370 Gma-Chr11 39083596 39085073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02370 11 121 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.268 4.15e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02370 - - gmx:100814138 307.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00205 18 1651755 1653216 Gma11g02370 11 39083596 39085073 ECH
Gma03g00322 03 5022576 5024360 Gma11g02370 11 39083596 39085073 ECH
Gma01g01329 01 46582158 46584335 Gma11g02370 11 39083596 39085073 ECH
Gma18g01949 18 52703996 52705362 Gma11g02370 11 39083596 39085073 ECH
Gma11g01817 11 20827860 20831725 Gma11g02370 11 39083596 39085073 ECH
Gma11g02370 11 39083596 39085073 Gma11g02370 11 39083596 39085073 ECH
Gma18g00205 18 1651755 1653216 Gma11g02370 11 39083596 39085073 GST
Gma11g02370 11 39083596 39085073 Gma14g00453 14 4342475 4344045 PCT
Gma14g00453 14 4342475 4344045 Gma11g02370 11 39083596 39085073 PCT