Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02357 ATGTTACTAGTGGAGAAAACCAACCTCACTTCACAATGCTTCAACCGTATTTCTGATAAGAAGAAAGAAAGATGGAAGACACACAACAACAACCCATGTCGTGTTTTGTTTCTCTTATGTATGTGGAGTCTTGTTGTGCTCCCTTCATGCGTGAGACCAGCTTTGTGTGAAGATGAAAGTTGGGACGGAGTGGTTGTGACAGCATCAAACCTCTTAGCACTTCAAGCTTTCAAGCAAGAGTTGGTGGACCCAGAAGGGTTCTTGCGGAGCTGGAACGACAGTGGCTATGGTGCTTGTTCAGGAGGTTGGGTTGGAATCAAGTGTGCTCAGGGACAGGTTATCGTGATCCAGCTTCCTTGGAAGGGTTTGAAGGGTCGAATCACTGACAAAATTGGCCAACTTCAAGGCCTTAGGAAGCTTAGTCTTCATGATAACCAAATTGGTGGTTCAATCCCTTCAACTTTGGGACTTCTTCCCAACCTTAGAGGGGTTCAGTTATTCAACAATAGGTTAACTGGTTCCATCCCTTCTTCTTTAGGTTTCTGTCCTTTGCTTCAGTCTCTTGACCTCAGCAACAACTTGCTCACAGGAGCAATCCCTTATAGCCTTGCCAATTCCACCAAGCTTTATTGGCTTAACTTGAGTTTCAACTCCTTCTCTGGTACTTTACCAACTAGCCTAACTCACTCATTTTCTCTCACTTTCCTTTCTCTTCAAAATAATAATCTTTCTGGCAACCTTCCTAACTCTTGGGGTGGGAGTCCCAAGAGTGGCTTCTTTAGGCTCCAAAATTTGATCCTAGATCATAATTTTTTCACTGGTAATGTTCCTGCTTCTTTGGGTAGCTTAAGAGAGCTCAGTGAGATTTCCCTTAGTCATAATAAGTTTAGTGGAGCTATTCCAAATGAAATAGGAACTCTTTCTAGGCTTAAGACACTAGACATTTCTAATAATGCCTTCAATGGGAGCTTGCCTGTTACCCTCTCTAATTTATCCTCACTTACATTGCTGAATGCAGAGAACAACCTCCTTGAAAATCAAATCCCTGAAAGTTTAGGTACATTGCGTAATCTTTCTGTTCTGATTTTGAGTAGGAACCAATTTAGTGGACATATTCCTTCAAGCATTGCAAACATTTCCATGCTTAGGCAGCTTGATTTGTCACTGAATAATCTCAGTGGAGAAATTCCAGTCTCCTTTGAAAGTCAACGTAGTCTTGATTTCTTCAATGTTTCTTACAATAGCCTTTCAGGTTCTGTTCCACCTCTACTTGCCAAGAAATTTAACTCAAGCTCATTTGTGGGAAATATTCAACTATGTGGGTATAGCCCTTCAACCCCATGTCTTTCACAAGCTCCATCACAAGGAGTCATTGCCCCAACTCCAGAAGTACTGTCAGAACAGCACCATCGTAGGAACCTCAGTACCAAAGACATAATTCTCATAGTAGCAGGAGTTCTCCTAGTAGTCCTGATTATACTTTGTTGCATCCTGCTTTTCTGCTTGATCAGAAAGAGATCAACATCGAAGGCTGAGAACGGACAAGCCACGGGGAGAGCAGCCGCTGGAAGGACAGAAAAAGGAGTCCCTCCAGTTTCTGCTGGTGATGTTGAAGCAGGTGGGGAGGCTGGAGGGAAACTAGTCCATTTTGATGGACCATTGGCTTTTACAGCCGATGATCTCTTGTGTGCAACTGCTGAGATCATGGGAAAGAGCACCTATGGAACAGTGTATAAGGCTATTTTGGAGGATGGAAGCCAAGTTGCAGTGAAGAGATTGAGGGAAAAGATCACTAAAGGTCACAGAGAATTTGAATCAGAAGTCAGTGTTCTAGGAAAAGTTAGACACCCCAATGTCTTGGCTCTGAGGGCCTATTACTTGGGACCCAAAGGGGAAAAGCTTCTGGTTTTTGATTACATGCCTAAAGGAGGTCTTGCTTCTTTCCTACATGGTGGTGGAACTGAAACCTTCATTGATTGGCCAACAAGGATGAAAATAGCACAGGACATGGCTCGTGGCTTGTTTTGTCTTCATTCCCTGGAGAACAttatacatgggaacctcacatccagcaatgtgttgcttgatgagaacacaaatgctaaaattgcagattttggTCTTTCTCGGTTGATGTCAACTGCTGCTAACTCCAACGTGATAGCTACTGCTGGAGCATTGGGATACCGGGCACCAGAGCTCTCAAAGCTCAAGAAAGCAAACACTAAAACTGATATATACAGTCTTGGTGTTATCTTGTTAGAACTCCTAACTAGGAAGTCACCTGGGGTGTCTATGAATGGACTAGATTTGCCTCAGTGGGTTGCCTCTATTGTCAAAGAGGAGTGGACAAATGAGGTTTTTGATGCAGACATGATGAGAGATGCATCGACAGTTGGCGATGAGTTGCTGAACACGTTGAAGCTCGCTTTGCACTGTGTTGATCCTTCTCCATCAGTACGCCCGGAAGTTCATCAAGTGCTCCAGCAGCTAGAAGAGATTAGACCAGAGAGATCAGTCACAGCCAGTCCTGGGGACGATACCATATAG 2550 0.4259 MLLVEKTNLTSQCFNRISDKKKERWKTHNNNPCRVLFLLCMWSLVVLPSCVRPALCEDESWDGVVVTASNLLALQAFKQELVDPEGFLRSWNDSGYGACSGGWVGIKCAQGQVIVIQLPWKGLKGRITDKIGQLQGLRKLSLHDNQIGGSIPSTLGLLPNLRGVQLFNNRLTGSIPSSLGFCPLLQSLDLSNNLLTGAIPYSLANSTKLYWLNLSFNSFSGTLPTSLTHSFSLTFLSLQNNNLSGNLPNSWGGSPKSGFFRLQNLILDHNFFTGNVPASLGSLRELSEISLSHNKFSGAIPNEIGTLSRLKTLDISNNAFNGSLPVTLSNLSSLTLLNAENNLLENQIPESLGTLRNLSVLILSRNQFSGHIPSSIANISMLRQLDLSLNNLSGEIPVSFESQRSLDFFNVSYNSLSGSVPPLLAKKFNSSSFVGNIQLCGYSPSTPCLSQAPSQGVIAPTPEVLSEQHHRRNLSTKDIILIVAGVLLVVLIILCCILLFCLIRKRSTSKAENGQATGRAAAGRTEKGVPPVSAGDVEAGGEAGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKAILEDGSQVAVKRLREKITKGHREFESEVSVLGKVRHPNVLALRAYYLGPKGEKLLVFDYMPKGGLASFLHGGGTETFIDWPTRMKIAQDMARGLFCLHSLENIIHGNLTSSNVLLDENTNAKIADFGLSRLMSTAANSNVIATAGALGYRAPELSKLKKANTKTDIYSLGVILLELLTRKSPGVSMNGLDLPQWVASIVKEEWTNEVFDADMMRDASTVGDELLNTLKLALHCVDPSPSVRPEVHQVLQQLEEIRPERSVTASPGDDTI 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02357 849 Pfam Protein tyrosine and serine/threonine kinase 566 831 IPR001245 GO:0004672|GO:0006468
Gma11g02357 849 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 18 842 - -
Gma11g02357 849 Pfam Leucine rich repeat N-terminal domain 71 108 IPR013210 -
Gma11g02357 849 Gene3D Transferase(Phosphotransferase) domain 1 641 846 - -
Gma11g02357 849 Gene3D Ribonuclease Inhibitor 256 451 IPR032675 -
Gma11g02357 849 MobiDBLite consensus disorder prediction 513 534 - -
Gma11g02357 849 Gene3D Ribonuclease Inhibitor 184 255 IPR032675 -
Gma11g02357 849 Gene3D Ribonuclease Inhibitor 69 183 IPR032675 -
Gma11g02357 849 ProSiteProfiles Protein kinase domain profile. 563 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02357 849 Gene3D Phosphorylase Kinase; domain 1 569 640 - -
Gma11g02357 849 Pfam Leucine rich repeat 261 319 IPR001611 GO:0005515
Gma11g02357 849 CDD STKc_IRAK 569 834 - -
Gma11g02357 849 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 18 842 - -
Gma11g02357 849 SUPERFAMILY Protein kinase-like (PK-like) 567 836 IPR011009 -
Gma11g02357 849 SUPERFAMILY L domain-like 107 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02357 Gma-Chr11 38973015 38975875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02357 59 836 Receptor kinase-like Gene Family AT3G51740 63.124 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma11g02357 PK_Tyr_Ser-Thr 2.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02357 - - gmx:100810353 1565.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00218 18 1743190 1745965 Gma11g02357 11 38973015 38975875 ECH
Gma11g02357 11 38973015 38975875 Gma11g02357 11 38973015 38975875 ECH
Gma18g00218 18 1743190 1745965 Gma11g02357 11 38973015 38975875 GST
Gma11g02357 11 38973015 38975875 Gma14g00470 14 4433081 4435654 PCT
Gma14g00470 14 4433081 4435654 Gma11g02357 11 38973015 38975875 PCT