Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02354 ATGCCAGTGTATCCGATTCATGGGCGTGGTGGAACTCAGAGAGATACTGAGCAAAATTCAATTGCTCTTCCTGGTTTTCCAAATCCAAATAAAGAGGTCAAGCATGTTTTGAACTGCTTGGAAAAGATAAAACTGTGGCAAGAGAAACCAAGTGTTTTGGTCATGAGTTATACTGCATTTCTAGCATTAATGAGAGAGGGTTCAGAGTTTGCCCATAGAAAATATATGGTTAAAGCATTAAGGGAAGGTCCTGGGATCTTGATACTTGATGAAGGGCACAACCCAAGAAGTACTAAGTCGAGGTTGAGAAAAGGGTTGATGAAAGTGGAAACAGATCTAAGGATACTGCTTTCCGCGTGGAATCCATTGAAGATGAAGCAGGCTATTGCACGCGCTTTTCGTCCCGGTCAAGAAAAGATGGTTTATGTGTATCAGCTCTTGGCAACAGGCACATTGGAGGAAGATAAGTACATAAGAACCACTTGGAAAGAGTGGGTTACTAGCATGATTTTTAGTGAGGCTTTTGAGGAGAACCCTTCACACTCGCGAGCATAG 555 0.4252 MPVYPIHGRGGTQRDTEQNSIALPGFPNPNKEVKHVLNCLEKIKLWQEKPSVLVMSYTAFLALMREGSEFAHRKYMVKALREGPGILILDEGHNPRSTKSRLRKGLMKVETDLRILLSAWNPLKMKQAIARAFRPGQEKMVYVYQLLATGTLEEDKYIRTTWKEWVTSMIFSEAFEENPSHSRA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02354 184 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 1 118 IPR044567 GO:0080188
Gma11g02354 184 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 118 184 IPR044567 GO:0080188
Gma11g02354 184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 172 IPR027417 -
Gma11g02354 184 MobiDBLite consensus disorder prediction 1 20 - -
Gma11g02354 184 Gene3D - 121 159 IPR027417 -
Gma11g02354 184 Gene3D - 16 120 IPR038718 -
Gma11g02354 184 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 1 118 - -
Gma11g02354 184 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 118 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02354 Gma-Chr11 38951262 38952636 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02354 K10875 - gmx:100781856 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02354 11 38951262 38952636 Gma11g02354 11 38951262 38952636 ECH
Gma18g00222 18 1777168 1779087 Gma11g02354 11 38951262 38952636 GST
Gma11g02354 11 38951262 38952636 Gma14g00474 14 4474915 4481318 PCT
Gma14g00474 14 4474915 4481318 Gma11g02354 11 38951262 38952636 PCT