Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02343 ATGAGCAAAAACTGGAAATCTAGCTGCTTTCGGGATCCTGGGGGAGTTCTGTTCCTTCTTGTGTTGTGTTTGTTGTTTCAGAACTTTAGTTTGTGCTGCTCTTTGAATGAAGAAGGTAAAGCTCTTTTGAAGTTCAAACAGGGAATAGTAAACGACCCTTTTGATGCTTTGTCCAATTGGGTTAATGATGAAGTGGAAGTTAACCCGTGTAATTGGTTTGGAGTTGAGTGCTCTGATGGAAGAGTAGTGGTCTTGAATTTGAAAGACCTTTGTCTCGAAGGAAATCTGGTACCTGAGCTTGCAAACCTTGTTCACATAAAGTCCATAATTTTGCGGAACAATTCTTTTCATGGAATCATCCCCCAAGGAATTGCACACTTGAATGAAATGGAGGTTTTGGATTTGGGCTACAACAACTTTAGTGGACCGCTACCTACAGATCTTGGGAATAATATTCCGCTGACAATCCTTTTGCTGGACAACAATGATCATCTTTGTGGTTTCTCTCCCGAAATTAATGAATTGAAGATGGTTTCTGAATATCAAGTAGATGAAAACCAACTAAGTAGTGCAGAAAAGGTGCCAATAAGATCCATCAAACGCCATGCTGGCCAAAATAATGGTGTTCGGAAGCTACTGCAAGTTCGTACTCGTGAAGGTGGAAGTCCTTTTAATCGGGTTTTTCCTGATAGTCCTGCTCCATTTCCTTCAGCTCCCTCACCTGCCCCAGCAACGCCACCAGTGGTTCAGAAGCCAGCTCCCGTTGACCGAAATAATTCTGCTTCTCCTTCTCCCCTGCCTGAACCACGCTCTGCACCGCTATCTAAAAGTAGCTCATCAAAGAACCATCTAGTTGTTATTTTGGCTGGAGTTATGGGTGGTGTTGTATTTCTTCTCATTTCAATCATTGGCCTATATCTCTGTAAAACAAACAAGGTAGCTACTGTAAAACCTTGGGCAACAGGATTAAGTGGACAGCTTCAGAAGGCATTTGTAACAGGTGTGCCAAAGCTAAAGAGATCAGAGCTTGAAGCAGCATGTGAAGATTTTAGTAATGTAATTGGCACTTCATCCATTGGTACAGTTTACAAAGGGACTTTATCTAGTGGTGTCGAAATTGCTGTGGCATCTGTTGCAGCGACATCATCCAAAGATTGGTCAAAGACTCTAGAAGCCCAATTTAGGAACAAGATAGATACATTATCAAAAGTGAACCACAAGAATTTTGTAAATCTTCTTGGACATTGTGAAGAAGATGAGCCTTTCACCAGAATGGTGGTTTTTGAGTATGCCCCAAATGGAACACTCTTTGAGCATTTACACATAAAAGAATCTGAGCACTTGGATTGGGGAACAAGACTTAGAGTTGCCATGGGCATGGCCTACTGCCTACAACATATGCACCAGTTGGAGCCTCCTTTGGTCCTTAGCAACCTGAATTCTTCAGGTGTCCAACTCACTGATGATTATGCTGCCAAAATCTCTGATTTGAGTTTCTTAAATGAAATAGCTTCAGCTGTGATAAAATCTCCTGCTAGAAAAAACACTGATATGACACCGGCAAGTAACATATACAGCTTTGGTGTTATATTATTTGAGATGGTAACTGGCAGACTCCCTTATTCAGTGGACAATGATGGCTCACTTGATGACTGGGCTTCACACTATTTACAAGGGGATCAGCCCCTCAAAGAAATGGTGGATCCAACTCTAGCATCCTTCCAAGAAGAACAGCTCGAACAAGTCGATGCTTTGATTAAATCTTGTGTCCATCCTGATCAAAAGCAAAGACCAACAATGAAAGAAGTTTGTGTGAGATTAAGAGAGATAACAAAAATAACACCTGATGCAGCTGTTCCAAAGCTTTCTCCACTTTGGTGGGCAGAGCTTGAGATTGCTTCTGTAGATGCAAGCTGA 1917 0.4173 MSKNWKSSCFRDPGGVLFLLVLCLLFQNFSLCCSLNEEGKALLKFKQGIVNDPFDALSNWVNDEVEVNPCNWFGVECSDGRVVVLNLKDLCLEGNLVPELANLVHIKSIILRNNSFHGIIPQGIAHLNEMEVLDLGYNNFSGPLPTDLGNNIPLTILLLDNNDHLCGFSPEINELKMVSEYQVDENQLSSAEKVPIRSIKRHAGQNNGVRKLLQVRTREGGSPFNRVFPDSPAPFPSAPSPAPATPPVVQKPAPVDRNNSASPSPLPEPRSAPLSKSSSSKNHLVVILAGVMGGVVFLLISIIGLYLCKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSSIGTVYKGTLSSGVEIAVASVAATSSKDWSKTLEAQFRNKIDTLSKVNHKNFVNLLGHCEEDEPFTRMVVFEYAPNGTLFEHLHIKESEHLDWGTRLRVAMGMAYCLQHMHQLEPPLVLSNLNSSGVQLTDDYAAKISDLSFLNEIASAVIKSPARKNTDMTPASNIYSFGVILFEMVTGRLPYSVDNDGSLDDWASHYLQGDQPLKEMVDPTLASFQEEQLEQVDALIKSCVHPDQKQRPTMKEVCVRLREITKITPDAAVPKLSPLWWAELEIASVDAS 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02343 638 MobiDBLite consensus disorder prediction 229 250 - -
Gma11g02343 638 SUPERFAMILY L domain-like 35 191 - -
Gma11g02343 638 Gene3D Transferase(Phosphotransferase) domain 1 431 619 - -
Gma11g02343 638 PANTHER BNAA09G55080D PROTEIN 1 638 - -
Gma11g02343 638 MobiDBLite consensus disorder prediction 255 277 - -
Gma11g02343 638 SUPERFAMILY Protein kinase-like (PK-like) 331 607 IPR011009 -
Gma11g02343 638 PANTHER PROTEIN MALE DISCOVERER 2 1 638 - -
Gma11g02343 638 Pfam Protein tyrosine and serine/threonine kinase 350 606 IPR001245 GO:0004672|GO:0006468
Gma11g02343 638 ProSiteProfiles Protein kinase domain profile. 348 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02343 638 MobiDBLite consensus disorder prediction 221 277 - -
Gma11g02343 638 Gene3D Phosphorylase Kinase; domain 1 320 430 - -
Gma11g02343 638 Gene3D Ribonuclease Inhibitor 33 214 IPR032675 -
Gma11g02343 638 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02343 Gma-Chr11 38844741 38848938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02343 17 603 Receptor kinase-like Gene Family AT1G66830 25.615 1.18e-45 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gma11g02343 PK_Tyr_Ser-Thr 5.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02343 - - gmx:100807163 1230.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02343 11 38844741 38848938 Gma11g02343 11 38844741 38848938 ECH
Gma18g00233 18 1891511 1896611 Gma11g02343 11 38844741 38848938 GST
Gma11g02343 11 38844741 38848938 Gma14g00484 14 4591154 4595348 PCT
Gma14g00484 14 4591154 4595348 Gma11g02343 11 38844741 38848938 PCT