Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02338 ATGGTGCGTGTCAAAGAAGCTCTCGTTGTCACCCCTTCCGAGCCCACACCGAATACCGTTCTCTCACTCTCAGCTCTTGACTCCCAACTCTTCTTGCGCTTCACCATCGAGTATCTTTTTATTTACAGGCCCGGCCCGGGCCTGGACCCAACTTCCACCGCGGCTCGTTTAAAAGCTGCATTAGCCAAAGCGCTTGTTCCTTATTATCCATTCGCCGGAAGGGTTCGCTCCAGGCCCGACGGCCCGGGCCTCGAGGTCGTTTGTCGGGCCCAGGGCGCTGTCTTCATCGAAGCCTCTTCTGAACGTTACACTGCCCATGATTTCCAAAAGGCCCCCAAGACAGTGGCACAATGGAGGAAACTATTATCTCTCTACGTCACCGACGTTCTCAAAGGCTCTCCAATTCTTGTTATTCAGTTGACGTGGCTTGCCGACGGCGCTGCAGCTGTCGGCGTCGGTATAAACCACTGCATCTGCGATGGCATCGGCAGTGCCGAGTTTCTCAATTATTTCTCGGACTTAGCATCCCATAATAATAACGTGAGTGTCGATCCCAAACCTAAACCCGTCTGGGATCGACAGCTCATGAACCCGGACGGCAGAACTCGGGCGAACCTGGCTATGCACGCCGAGTTTGTCCGGGTTCCGGATTTGTGCGGGTTCATGAACCGTGTCACGAGCGGGCTGAGACCAACTTGCATTGTGTTCGACGAGAGGCGGATCAACGCGCTGAAGGGCGCGTGCGGAATGTCGTCGTACACGTCGTTCGAGGTTCTGGCGGCGCACGTGTGGAGGAGTTGGGCGAGGGCGATGGGGTTTCCTAAAAACCAGACGCTGAAGCTTTTGTTTAGCGTGAACGTGCGGAAGCGCGTGAAGCCGGGACTGCCGGAGGGGTATTATGGGAATGCGTTTGTGTTGGGATGCGCGCAGACAAGCGCGTGGGAGTTGGGGGAGAGAGGGGTCAGGTACGGGTCGGGTCTGGTGAAGCGTGCGAAGGAGAGGGTGGACAGCGAGCACGTGCGGAGGGTGGTTGAGTTGGTCTCCGAGTCGAGGGCGAGTCCTGACTCGGTGGGGGTGCTGATTCTGTCGCAGTGGTCGAGGCTGGGGCTTGAGAGGGTTGAACTCGGGATGGGGAAGCCTCTGCATGTGGGGCCCATATGCTGTGATAGGTACTGTTTGTTTCTTCCGGTGACCGGTGAACGGGCGAGTGTGAAGGTCATGGTGGCTGTCCCCACCACCGCCGTTGACAACTTTCACCGTTTCCTCCGGGAATCGAATTTATGA 1284 0.5709 MVRVKEALVVTPSEPTPNTVLSLSALDSQLFLRFTIEYLFIYRPGPGLDPTSTAARLKAALAKALVPYYPFAGRVRSRPDGPGLEVVCRAQGAVFIEASSERYTAHDFQKAPKTVAQWRKLLSLYVTDVLKGSPILVIQLTWLADGAAAVGVGINHCICDGIGSAEFLNYFSDLASHNNNVSVDPKPKPVWDRQLMNPDGRTRANLAMHAEFVRVPDLCGFMNRVTSGLRPTCIVFDERRINALKGACGMSSYTSFEVLAAHVWRSWARAMGFPKNQTLKLLFSVNVRKRVKPGLPEGYYGNAFVLGCAQTSAWELGERGVRYGSGLVKRAKERVDSEHVRRVVELVSESRASPDSVGVLILSQWSRLGLERVELGMGKPLHVGPICCDRYCLFLPVTGERASVKVMVAVPTTAVDNFHRFLRESNL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02338 427 Pfam Transferase family 1 419 - -
Gma11g02338 427 Gene3D - 224 424 IPR023213 -
Gma11g02338 427 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 3 421 - -
Gma11g02338 427 Gene3D - 1 213 IPR023213 -
Gma11g02338 427 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02338 Gma-Chr11 38810259 38811716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02338 2 424 Monolignol Biosynthesis Gene Families AT5G48930 28.604 2.03e-47 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02338 - - gmx:100803812 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02338 11 38810259 38811716 Gma14g00488 14 4615884 4617424 PCT
Gma14g00488 14 4615884 4617424 Gma11g02338 11 38810259 38811716 PCT