Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02337 ATGTTAGTGAGAGGCATGAAGGGTTATGAGCCCCGTTCAAGCTCTTCATGTGCAGCTTGCAAGTTATTGAAGAGAAGATGCATACCAAATTGTATTTTTGCACCTTACTTTAGGTCTGATGAGTGCAAGAAGTTTGCAAAGGTGCACAAGGTGTTTGGAGCAAGCAATGTGAGCAAGATTCTGATTGAAGTGCCGGAAGAGCAGAGAGAGGACACAGTGAATTCTCTTGCTTATGAGGCTGAGGCAAGGCTGAGAGACCCGGTTTATGGATGCATTGGTGCCATAGCTCTGTTGCAAAGGAAGATGGTGGAGCTTCAACATGATCTGGTCATCGCAAAGGATCGTCTCGCGCgttgtcacgctgctgctactgctgctgccaccaccaccaccactactagtatcccttctcctgATATCTTGCATGCCAATGTCTCACAATTTCACCAAATGATGAAGAGTGCCAACATTTCTGCAAGAACAAAAGAAAGATACGGATATATTGTACATGCACAATAG 519 0.3873 MLVRGMKGYEPRSSSSCAACKLLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLVIAKDRLARCHAAATAAATTTTTTSIPSPDILHANVSQFHQMMKSANISARTKERYGYIVHAQ 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02337 172 Coils Coil 95 115 - -
Gma11g02337 172 Pfam Lateral organ boundaries (LOB) domain 16 113 IPR004883 -
Gma11g02337 172 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 150 - -
Gma11g02337 172 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 6 150 - -
Gma11g02337 172 ProSiteProfiles LOB domain profile. 15 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02337 Gma-Chr11 38798322 38800398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02337 6 116 AS2 family AT3G11090 80.180 3.47e-64 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma11g02337 LOB 1.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02337 - - gmx:100305534 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02337 11 38798322 38800398 Gma11g02337 11 38798322 38800398 ECH
Gma18g00238 18 1924368 1926528 Gma11g02337 11 38798322 38800398 GST