Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02330 ATGAAAACATCACCTTCCTCCGTTAACCTCTGTCTCGCCGTCGCCGTCGCCGCCGTCGTACTTATTCTCTCTCTGGTACCTTCATCCCATGGTTTTGGCTCCGGCACCACCCTGGCCCTCTCCGACGCCTCCGCCACCGTCTGCGCCGTCGTAGCATCCGAGTCCACGCGCCGCATTGAGTGTTACCGTCAGGGGCAGGTAGTTCCCATCGCTCCCAACGTTAATTTTTCGTCGATTTCCGGTGGGAGAAACTACTTCTGCGGCATAATGTCCAGCAACTCCAATCTGCTTTGCTGGAACACAAACTCTTCCTTCGAAATGAGAAGGCTTTACAACAAAAGTTCTGTTCCATTGGAGAATCTCGCCGTCGGGGACACCCACGTTTGCGCCACCGCGGTGGGTGATGGCACGGTGCGGTGCTGGAGAACCGGTGACACGTTTCGAAATCCATCTGGGTCTGATCAATTCGCTTCAATTTCATCTGGGTCGGGCTTCTCTTGCGGAATTTTGAAGAATGGTTCTAAGGTTCGGTGTTGGGGAGACACCAACGTTGCGCAACAGATTGAAAATTCGTTTGGGAACATGTCCATGTTGAGTCTCGTCGCAGGTGGTTCGAATATTTGTGGGTTGAACTCAACGGGGTTTTTGGTGTGTTCTGGGCAACTTGATTTTCCTCGAGGTGGGGCTTTTGAGTATTCAGGATTGGCACTTGGTGCTGAGCATGGTTGTGCTATTAGAGGGTCGAATGGTTGGGTTGTGTGTTGGGGTGGCAATGGACAATTCTCTGTAAATAATGTTACAGAAGGAGTTTCCTTTGAGGTAATTGTTTCTGGTTCTAACTTTGTTTGTGGATTGACAACGAACAATTTGAAAGTGGTGTGTTGGGGTCCTGGTTGGTCTAATTACTCTAATAGTTCGAGGTTTGAGCTTCCATTGCCTCGTGTTCTTCCAGGGCCTTGTGTTTCATTTTCTTGTGCAGAGTGTGGTTCATATGTTGATTCTCAAACTCTATGTTCTGGTTCTGGTAACATTTGTAAGCCAATGACATGTAGGCCTCAAACAACAGCTCCGCCTCCCCTGCTGCCAACACCACCACCACCATCTCAGTCTCCGCCGCCACCGCCATCAACACCCCCACCATCATCAACTCGATCGAAAACCTTGACAAGGGGGTTATTGGCTTTTGCTATTATTGGTTCAGTGGGAGCTTTTGCTGGAATATGCACAATAGTTCATTGCTTGTGGAGTGGAGTTTGTTTTGGGAAGAAGAAAGTACACAATTCTGTGCAGCCTACAATCACAAGAGGAAGCAGTGGCTCAAGTGGTGGGGGTGCTTCTAATAATAGCAATTCTTCGATATCATCTATGATTATGCGTCAGACTTCAATAATAATGAGGCGGCAGAGGAGTGGAACCTCATCAACAAAGCATCCAGACAGGGCTGAGGAGTTCACTCTAGCTGAGCTTGTGGCTGCCACCAACAATTTCTCACTTGAAAACAAGATTGGTTCTGGAAGCTTTGGTGTTGTGTACAAAGGCAAGCTCGCGGAGGGTCGTGAGGTGGCAATCAAGAGGGGTGAAACCGGGTCCAAGATGAAGAAGTTTCAAGAGAAAGAGAGTGCATTTGAGTCTGAATTGGCCTTCTTGTCGCGCCTGCACCATAAGCACCTTGTTGGGCTAGTTGGGTTCTGTGAAGAGAAAGATGAGAGGCTCTTGGTGTATGAGTACATGAAGAATGGGGCTTTGTATGATCATTTGCATGCAAAGAACAATGTGGAGAAGGAAAGCAGTGTATTGAATAATTGGAAAATGAGGATCAAAATTGCTTTGGATGCTTCCCGGGGAATAGAATATCTTCACAATTATGCAGTTCCGTCTATTATTCACAGAGATATAAAGTCTTCCAACATTCTTCTTGATGCTACTTGGACGGCAAGAGTATCTGATTTTGGATTGTCTTTGATGAGTCCAGAACCTGACCGTGATCACCGACCAATGAAGGCAGCGGGAACAGTTGGATATATTGATCCTGAGTACTATGGTCTAAATGTGTTGACAGCAAAGAGTGATGTGTATGGGCTTGGAGTTGTATTGCTTGAACTTTTAACGGGAAAGAGAGCTATATTCAAGTATGGAGAAGATGGAGGCACCCCATTGAGTGTGGTGGACTTTGCAGTGCCTGCTATTTTGGCCGGAGAATTAGTGAAAATTTTGGATCCAAGGGTTGGACCACCCGATGTGAATGAGGCCGAGGCAGTGGAATTAGTGGCCTATACAGCCATTCATTGTGTCAATTTGGAAGGGAAAGATAGACCAACCATGGCTGACATTGTGGCCAATTTGGAGAGGGCTTTGGCTATTTGTGAGAGTAGCCATGACAGCACTTCCAGCGGTACTATCTCTGTTGTTTCAGAATGA 2418 0.4719 MKTSPSSVNLCLAVAVAAVVLILSLVPSSHGFGSGTTLALSDASATVCAVVASESTRRIECYRQGQVVPIAPNVNFSSISGGRNYFCGIMSSNSNLLCWNTNSSFEMRRLYNKSSVPLENLAVGDTHVCATAVGDGTVRCWRTGDTFRNPSGSDQFASISSGSGFSCGILKNGSKVRCWGDTNVAQQIENSFGNMSMLSLVAGGSNICGLNSTGFLVCSGQLDFPRGGAFEYSGLALGAEHGCAIRGSNGWVVCWGGNGQFSVNNVTEGVSFEVIVSGSNFVCGLTTNNLKVVCWGPGWSNYSNSSRFELPLPRVLPGPCVSFSCAECGSYVDSQTLCSGSGNICKPMTCRPQTTAPPPLLPTPPPPSQSPPPPPSTPPPSSTRSKTLTRGLLAFAIIGSVGAFAGICTIVHCLWSGVCFGKKKVHNSVQPTITRGSSGSSGGGASNNSNSSISSMIMRQTSIIMRRQRSGTSSTKHPDRAEEFTLAELVAATNNFSLENKIGSGSFGVVYKGKLAEGREVAIKRGETGSKMKKFQEKESAFESELAFLSRLHHKHLVGLVGFCEEKDERLLVYEYMKNGALYDHLHAKNNVEKESSVLNNWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDATWTARVSDFGLSLMSPEPDRDHRPMKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKYGEDGGTPLSVVDFAVPAILAGELVKILDPRVGPPDVNEAEAVELVAYTAIHCVNLEGKDRPTMADIVANLERALAICESSHDSTSSGTISVVSE 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02330 805 Pfam Regulator of chromosome condensation (RCC1) repeat 157 182 - -
Gma11g02330 805 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Gma11g02330 805 SMART serkin_6 496 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02330 805 SUPERFAMILY RCC1/BLIP-II 33 261 IPR009091 -
Gma11g02330 805 Gene3D Phosphorylase Kinase; domain 1 456 576 - -
Gma11g02330 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Gma11g02330 805 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 6 802 - -
Gma11g02330 805 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 6 802 IPR044815 GO:0004674
Gma11g02330 805 Gene3D Transferase(Phosphotransferase) domain 1 577 800 - -
Gma11g02330 805 SUPERFAMILY Protein kinase-like (PK-like) 473 781 IPR011009 -
Gma11g02330 805 ProSiteProfiles Protein kinase domain profile. 496 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02330 805 MobiDBLite consensus disorder prediction 431 452 - -
Gma11g02330 805 Gene3D - 28 150 IPR009091 -
Gma11g02330 805 Gene3D - 151 305 IPR009091 -
Gma11g02330 805 MobiDBLite consensus disorder prediction 355 381 - -
Gma11g02330 805 MobiDBLite consensus disorder prediction 355 386 - -
Gma11g02330 805 Pfam Protein kinase domain 497 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02330 Gma-Chr11 38666843 38669294 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02330 12 805 Receptor kinase-like Gene Family AT3G55950 58.537 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gma11g02330 Pkinase 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02330 - - gmx:100805573 1483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00247 18 2043429 2045852 Gma11g02330 11 38666843 38669294 GST