Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02327 ATGTATGTGTTCTTCCAAGTGGTTCTGATTGCAAACTCACTTCCTGCCTTAAATGATGTCACTGCAATGGAGCTTCCTGATATTGTAGCTGAGGCTGCCAAGGTTTTGGCACCACTTTCAATTGGCTTTGTTGTGTTCATGGTTCACTTGGAAACCATCCCGATAACAGGAACTGGCATTAACCCTGTTAGGAGTCTAGGAGCTATTGTCATGTACAACCAACATAAGGGCTATATTAGGGAAGTCAGAGACAATTGA 258 0.4302 MYVFFQVVLIANSLPALNDVTAMELPDIVAEAAKVLAPLSIGFVVFMVHLETIPITGTGINPVRSLGAIVMYNQHKGYIREVRDN 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02327 85 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 34 78 IPR034294 -
Gma11g02327 85 Pfam Major intrinsic protein 35 77 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma11g02327 85 Gene3D Glycerol uptake facilitator protein. 1 80 IPR023271 -
Gma11g02327 85 SUPERFAMILY AF1104-like 5 34 IPR036075 -
Gma11g02327 85 PANTHER AQUAPORIN PIP2-2-RELATED 34 78 - -
Gma11g02327 85 SUPERFAMILY Aquaporin-like 33 75 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02327 Gma-Chr11 38650267 38651132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02327 35 78 Major Intrinsic Protein MIP AT2G16850 75.000 4.26e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02327 K09872 - osa:4336424 76.6405