Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02326 ATGGATACTGAAACCGTTGAGAGAATTGATGTGAGGGATAACACAGATGATGCAAGGAGTTTTAGCATGGCAGTCGACAGCGACATAAGGAGTGATACTGGGTCCATTTTTGGAGAATCTCGTGTCCGTAGTTTTGCTTCATTAGTGGACAGTGCCATAAGGAGTAGTAGTGCCAGTGAAGCAGATTTGGGATCATCCCCTTCCCCAGTGCATGCTTTTGCTGCACCATTATTCACCCTCGCTGAACTTAAAGCAGCCACCAATAATTTCTCATTTGACAACAAGATTGGTACCGGAGGCTTTGTTGTTGAGTACAGAGGCAAACTCGTTGATGGTCGTGAGGTTGCAATCAAGAGGGGTAAAACCTGGTCAAACTCATTTGGTAAGTCTAAGTTTGCCTTGTTCTCCCGCTTACACCACAAGAATTTGGTTGGGCTGGTTGGATTTTGTGAAGAAAAATATGAAAGGCTCTTGGTGTATGAGTACATGAAGAATGGGACGTTGTATCATCATTTGCATAGCAAGAAGGGTAGCAGTGTGTTGAATTCATGGAAAATGAGGATCAAAATTGCCGTCGCTGTTTCTGAGGGAATACAATATCTTCATAACTATGCATCTATTATTCACAAAAATATCATGTCTTCCAATATTCTTTTCGATGCTACTTGGACAGCAAGAGTATCTGGTTTTGATTTGTGGCTGGTGAATCCAGAACCTGACCGGGATTACCGAACAATGTGGACAGTGGGAACCTTTGGATATATTGATCCTGAGTACTATGGTCTAAATGTGTTGACAGCAAAGAGTGATGTGTATGGGCTTGGAGTTGTATTGCTTGAACTTTTAACGGGAAAGAGAGCTAAATTCAAGTATGAGGGGAAAGATTTCGTATGCACCCCAATAAAAAGTGTGGTGGATTTTGCAGTGCCTGTTATTTTGACCGGAGAGTTAGTGAAAATTTTGGATCCAAGGGTTGGACCACCCGATGTGAATGAGGCTGAGGCGGTGGAACTAGTGGCCTATACAGCCATTCATTGTGTGAATTTGAAAGGGAAAGATAGACCAACCATGGCTGACATTGTGGCCAATTTGGGGAGGGCTTTGGCTATTTGTGAGAGTAGCCATATATGA 1131 0.4288 MDTETVERIDVRDNTDDARSFSMAVDSDIRSDTGSIFGESRVRSFASLVDSAIRSSSASEADLGSSPSPVHAFAAPLFTLAELKAATNNFSFDNKIGTGGFVVEYRGKLVDGREVAIKRGKTWSNSFGKSKFALFSRLHHKNLVGLVGFCEEKYERLLVYEYMKNGTLYHHLHSKKGSSVLNSWKMRIKIAVAVSEGIQYLHNYASIIHKNIMSSNILFDATWTARVSGFDLWLVNPEPDRDYRTMWTVGTFGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAKFKYEGKDFVCTPIKSVVDFAVPVILTGELVKILDPRVGPPDVNEAEAVELVAYTAIHCVNLKGKDRPTMADIVANLGRALAICESSHI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02326 376 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 72 373 - -
Gma11g02326 376 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 1 62 - -
Gma11g02326 376 Gene3D Transferase(Phosphotransferase) domain 1 163 374 - -
Gma11g02326 376 Pfam Protein kinase domain 91 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02326 376 Gene3D Phosphorylase Kinase; domain 1 53 162 - -
Gma11g02326 376 ProSiteProfiles Protein kinase domain profile. 90 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02326 376 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 1 62 IPR044815 GO:0004674
Gma11g02326 376 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 72 373 IPR044815 GO:0004674
Gma11g02326 376 SUPERFAMILY Protein kinase-like (PK-like) 66 363 IPR011009 -
Gma11g02326 376 Coils Coil 376 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02326 Gma-Chr11 38642860 38644360 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02326 71 375 Receptor kinase-like Gene Family AT3G55950 58.589 6.14e-110 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gma11g02326 Pkinase 1.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02326 - - gmx:100804497 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00249 18 2051864 2053582 Gma11g02326 11 38642860 38644360 GST