Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02324 ATGTTAGGAGTGATTGACCCGCACATGCATATGGATCCAATCGATGATGCAAGGAGTTTTAGCTGGGCAGTGGACAGCGCCATAAGGAGTGAGACTGGGTCCATTTTTGGAGAATCTCGTGTCCGTAGTTTTGATTCGTTAGTGGACAGTGCCATAAGGAGTAGTAGTGCTACTGAAGAAGATTTGGGATCATCCCCGGTCCATGTTTTTGCTATGGCAGAAGACAGGGCGATGAGGAGTAGTAGTGGAGCTGATTTGGGAACATTCCCTTTTCATGTTTTTGCTACGGCTGCGGATATGAGGACTATTGCAGCACGATTAACAAAAGCCGTGTCGAATGCAAAAAGACATTTTGCTGAAGGATTATTTACCCGGGCTGAGCTTATACCAGTCACCCAGGCTGAGCTTGAACCAGCCACCAACAATTTCCCTGGATTATTATTTACCCTGGCTGAGCTTAAAGCAGCCACCAATAATTTCTCTAGTGACAACATGATTGATTTTTATGTGTACAGAGGCAAACTCGTTGATGGTCGTGAGGTTGCAATCAAAAAGAGGATAGCAACCAGGGGAGACTCGTTTGGTAAGTCTGAATTTGCCATCTTTTCCCGTTTACATCACCGGAACTTGGTTGGGCTGGTTGGGTTCTGCAAAAACAGAAATGAAAGGCTGCTGGTGTATGAGTACATGAAGAATGGGTCGTTGCATGATCATTTGCATGACAAGAACAATGTGGAGAAGGCTAGCAGTGTGTTGAATTCGTGGATAATGAGGATCAAGATTGCTTTGGACGCTTCCCGTGGAATACAATATCTTCATAGTTATGCAGTTCCATCCATTATTATTCACATAGACATAAAGCCTTCCAATATTCTTCTTGATGCTACTTGGACGGCAAGAGTATTTAATTTTGATTTGTCGTTCATGAATCGAGAATCTGACTGTGATGATGTACACACTGAGCCAGTAGCGAGAACCGTGGGATACATTTGTCCTGAGTACTTGGGTGTGGTGACAACAAAGTGTGATGTGTACGGGCTTGGAGTTGTACTGCTTGAACTTTTAACGGGTAAGACAGCTTTCTTCAAGTCTGAGGAAGATGGAGGCCCTGCATTGTATGTGGTGGAGTTTGCAGTGCGTGCTATTTTGGCTGGAGATTTGGTCGAAATTTTAGATTCAAGGGTTGGACCACCCCATGAGAAAGAAGCAGAGGCACTGGAGATCCTGGCCTATACCGCTATATGTTGTGTGAAAAGGAAAGGAAAGGATAGACCAACCATGAATGACATTGTGGCCAGTTTGGAGCTGGCTTTGGCTCTTTGTGGTAGTAGCCTATATTATGAGAATTTTTCCTCTGCATTACAATCACATGAGTCCTTTCACATGAGTATGTATCCTCTTCATTTAGAGGAATTTTACACAAGACGTAGTAGTATTTCTCTCTCCTGCTGGGGTATTAATATTCCAGTAAATACAGAAGATGTACTCATGTATATTCCAGTATATGCATGA 1512 0.4339 MLGVIDPHMHMDPIDDARSFSWAVDSAIRSETGSIFGESRVRSFDSLVDSAIRSSSATEEDLGSSPVHVFAMAEDRAMRSSSGADLGTFPFHVFATAADMRTIAARLTKAVSNAKRHFAEGLFTRAELIPVTQAELEPATNNFPGLLFTLAELKAATNNFSSDNMIDFYVYRGKLVDGREVAIKKRIATRGDSFGKSEFAIFSRLHHRNLVGLVGFCKNRNERLLVYEYMKNGSLHDHLHDKNNVEKASSVLNSWIMRIKIALDASRGIQYLHSYAVPSIIIHIDIKPSNILLDATWTARVFNFDLSFMNRESDCDDVHTEPVARTVGYICPEYLGVVTTKCDVYGLGVVLLELLTGKTAFFKSEEDGGPALYVVEFAVRAILAGDLVEILDSRVGPPHEKEAEALEILAYTAICCVKRKGKDRPTMNDIVASLELALALCGSSLYYENFSSALQSHESFHMSMYPLHLEEFYTRRSSISLSCWGINIPVNTEDVLMYIPVYA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02324 503 SMART serkin_6 170 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02324 503 SUPERFAMILY Protein kinase-like (PK-like) 141 435 IPR011009 -
Gma11g02324 503 Gene3D Phosphorylase Kinase; domain 1 144 229 - -
Gma11g02324 503 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 11 138 - -
Gma11g02324 503 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 11 138 IPR044815 GO:0004674
Gma11g02324 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Gma11g02324 503 Gene3D Transferase(Phosphotransferase) domain 1 230 442 - -
Gma11g02324 503 ProSiteProfiles Protein kinase domain profile. 154 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02324 503 Pfam Protein kinase domain 170 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02324 503 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 138 446 IPR044815 GO:0004674
Gma11g02324 503 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 138 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02324 Gma-Chr11 38631363 38633276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02324 148 444 Receptor kinase-like Gene Family AT3G55950 56.740 2.54e-93 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gma11g02324 Pkinase 1.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02324 - - gmx:100800078 964.911