Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02317 ATGGCTAAGTACTATGATATTGATGATATTATCATTGAGGAAGAGACTGTGTCAGTTATATTTCAGAGGGCTGCATCTGGAGTGGGAATAGATCCCAGTTCTTCAATCCTTATTGAAACAGGTTCAAAAGTTGAACTGCCGTTTTGGCTTGCTCATGAGTTACAGTTGAGACAAGCAGTATCAGTCAATGTTCCTCCTTGTTTCAATCAAAAAACAAGGCAGGAGCTCCATGCTGATTCTGCAGGTGTGGATCTGAGGTCCAGATGTCCATTTTTCTATGAATTTGGTTGCAAGATAGCACCCATAGTTGGCGACCGAACCATTGGGTTTCTGTTGTTGACTGCATTTAAGAGTAGGTACAAGGAAATTCTCACCAAGGCACATACTGTAGCATTTGCACCTGGTTCCAAATTTTGGACTATTCTAACAAAAGAAGAGATCTACTTGTATGAGACAGCTCAATCTGCAATGGCATCTTTCAAGAAGTGGCGAATGGGGGGACCCAGATTTCAGATAGCTTCTGTTCTGGGAAGAAAGAGAAAATCTAAGGAATAG 555 0.4144 MAKYYDIDDIIIEEETVSVIFQRAASGVGIDPSSSILIETGSKVELPFWLAHELQLRQAVSVNVPPCFNQKTRQELHADSAGVDLRSRCPFFYEFGCKIAPIVGDRTIGFLLLTAFKSRYKEILTKAHTVAFAPGSKFWTILTKEEIYLYETAQSAMASFKKWRMGGPRFQIASVLGRKRKSKE 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02317 184 Pfam GINS complex protein 44 146 IPR021151 -
Gma11g02317 184 SUPERFAMILY PriA/YqbF domain 2 65 - -
Gma11g02317 184 CDD GINS_A_psf3 60 166 - -
Gma11g02317 184 Gene3D - 1 166 IPR038437 -
Gma11g02317 184 PANTHER UNCHARACTERIZED 1 183 IPR010492 -
Gma11g02317 184 SUPERFAMILY GINS helical bundle-like 64 165 IPR036224 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02317 Gma-Chr11 38585493 38587377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02317 1 182 Core DNA Replication Machinery Family AT3G55490 67.760 3.16e-91 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02317 K10734 - gmx:100797609 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02317 11 38585493 38587377 Gma11g02317 11 38585493 38587377 ECH
Gma18g00255 18 2097442 2099325 Gma11g02317 11 38585493 38587377 GST