Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02308 ATGGCCACTGCCACCGCCGCCGCCGCCACGTCATACTTTTTCGGCACCCGTCTCAACAACGTTAACACGACAACCTTAAACAACGGAAGATTCCACGCGCTCTTGAACTTCGGCAAAAAGAAGACGGCGCCGCAGCCGCCGCCGAAGAAAAAGGAAGTGAAAGTGAAACCCTCCGGAGACCGGCTGGTGTGGTTCCCGAATGCGGAGCCGCCGGAGTGGCTCGATGGAAGCATGATCGGCGACCGCGGGTTCGACCCGTTCGGGTTCGCGAAGCCCGCGGAGTACCTGCAGTTCGACCTGGACTCGCTGGACCAGAACCTCGCGAAGAACATCGCCGGCGATGTGATCGGAACCAGGGTGGAGGTCGCCGAGGTTAAGCCGACGCCGTTTCAGCCCTACTCGGAGGTTTTCGGGATTCAGAGGTTCCGTGAGTGCGAACTCATTCATGGAAGGTGGGCAATGCTGGGTTCTCTCGGTGCTTTGGCCGTTGAGGCTCTCACGGGAGTCGCATGGCAAGACGCCGGAAAGGTAGAGCTAGTGGAAGGATCATCTTACCTGGGACTTCCTCTTCCATTTTCATTGACCACACTGATCTGGATTGAGGTGATAGTGATAGGGTACATAGAGTTTCAAAGAAATGCAGAACTTGACCCAGAGAAAAGGTTGTACCCAGGTGGCAGGTTCTTTGATCCTCTGGGTTTGGCCAACGACCCTGAAGAAAAAGCCAGACTTCAACTTGCTGAGATCAAGCATTCTCGCTTAGCCATGGTGGTCTTCCTCATCTTTGCAATTCAAGCTGCTGTGACAGGAAAAGGCCCAATCAGTTTTCTTGCTACCTTCAACAAGTGA 849 0.5465 MATATAAAATSYFFGTRLNNVNTTTLNNGRFHALLNFGKKKTAPQPPPKKKEVKVKPSGDRLVWFPNAEPPEWLDGSMIGDRGFDPFGFAKPAEYLQFDLDSLDQNLAKNIAGDVIGTRVEVAEVKPTPFQPYSEVFGIQRFRECELIHGRWAMLGSLGALAVEALTGVAWQDAGKVELVEGSSYLGLPLPFSLTTLIWIEVIVIGYIEFQRNAELDPEKRLYPGGRFFDPLGLANDPEEKARLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPISFLATFNK 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02308 282 Pfam Chlorophyll A-B binding protein 70 266 IPR022796 -
Gma11g02308 282 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 282 IPR001344 GO:0009765|GO:0016020
Gma11g02308 282 SUPERFAMILY Chlorophyll a-b binding protein 58 279 - -
Gma11g02308 282 Gene3D Chlorophyll a/b binding protein domain 63 282 - -
Gma11g02308 282 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.3, CHLOROPLASTIC 1 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02308 Gma-Chr11 38479078 38483059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02308 14 279 Chloroplast and Mitochondria Gene Families AT3G08940 70.677 8.05e-135 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02308 K08915 - gmx:100794604 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00263 18 2173883 2176862 Gma11g02308 11 38479078 38483059 GST