Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02302 ATGGCAAGGAAACTGACGAAAGCGCAGAAGAAGATAGCATACGATGCGAAGCTGTGCAAGCTTCTGGACAATTACACCCAAATTCTTGTGGTGGCTGCGGACAACGTCGGATCCAACCAGCTTCAGAACATTCGACACGGTCTACGTGGCGACTCGGTGATTCTCATGGGAAAGAACACCATGATGAAGCGCAGTATTAAGATCCACGCCCAGAACACCGGCGACACCACCATCCTCAACCTTATTCCCCTTCTAGTCGGTAACGTGGGGTTGATTTTCACCAAAGGTGACGTCAAGGAGGTTAAGGAAGTGGTTTCCAAGTACAAGGTGGCAGCTCCTGCTCGTGTAGGTTTAGTTGCACCTATTGATGTTATTGTTCCCCCAGGCAACACAGGGCTGGATCCCTCTCAGACCTCTTTCTTTCAGGTGCTTAACATCCCTACCAAGATTAATAAGGGTACTGTGGAAATTGTCACCCCTGTAGAACTCATTATGAAGGGAGACAAGGTTGGCTCTTCCGAAGCCGTATTGCTTTCCAAGCTTGCGATAAGGCCTTTCTCATATGGGCTTGCTGTTGTTTCTGTTTATGACAATGGTTCAGTTTTTAGCCCCGAGGTTCTTGATCTCACTGAAGATGACCTCGTTGTCAAGTTTGCAGAGGGTGTCTGTATGGTGTCTTCACTTTCATTGGCTATCTCGTACCCATCCATTGCAGCTGCTCCACACATGTTTGTCAATTCCTATAAGAACATCCTGGCTGTTGCAGTGGCAACAGAATATTCGTTCCCCGAGGCAGACAAGGTTAAGGAGTACTTGAAGGATCCTAGTAAATTTGCTGTAGCGGTTGTTGCCGCACCTGCTACTAAATCTGGCGCTGCTCCAGCGGCTGCATCCAAGGTGGAGGAAAAGAAGGAAGAAGCAGATGAATCTGATGACGACATGGGCTTCAGTTTGTTTGATTAA 963 0.4787 MARKLTKAQKKIAYDAKLCKLLDNYTQILVVAADNVGSNQLQNIRHGLRGDSVILMGKNTMMKRSIKIHAQNTGDTTILNLIPLLVGNVGLIFTKGDVKEVKEVVSKYKVAAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIVTPVELIMKGDKVGSSEAVLLSKLAIRPFSYGLAVVSVYDNGSVFSPEVLDLTEDDLVVKFAEGVCMVSSLSLAISYPSIAAAPHMFVNSYKNILAVAVATEYSFPEADKVKEYLKDPSKFAVAVVAAPATKSGAAPAAASKVEEKKEEADESDDDMGFSLFD 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02302 320 MobiDBLite consensus disorder prediction 306 320 - -
Gma11g02302 320 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Gma11g02302 320 Gene3D - 6 209 IPR043141 -
Gma11g02302 320 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Gma11g02302 320 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 320 - -
Gma11g02302 320 Pfam Ribosomal protein L10 7 108 IPR001790 -
Gma11g02302 320 MobiDBLite consensus disorder prediction 286 320 - -
Gma11g02302 320 CDD Ribosomal_P0_L10e 9 185 - -
Gma11g02302 320 PIRSF L10E 1 320 IPR030670 GO:0042254
Gma11g02302 320 Pfam 60s Acidic ribosomal protein 235 319 - -
Gma11g02302 320 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 1 320 - -
Gma11g02302 320 Gene3D - 113 185 IPR043164 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02302 Gma-Chr11 38422509 38425114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02302 1 319 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 76.489 2.35e-174 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02302 K02941 - gmx:100791968 557.755