Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02298 ATGGAAGAGGGCATGTCAGAGTTTTTTAGTAGCGGTGTAAGTGTTGGTGGTAACAGTGGCAGTGCTACTACTGGCACCAAGTGTGGGCGTTGGAATCCCACTACTGAACAGGTTAAGGTTCTGACTGAACTTTTCAGTTCTGGACTACGCACCCCCAGCACTGATCAGATTCAAAAGATCTCTAATCAGCTTAGTTTTTATGGTAAGATTGAGAGCAAGAACGTGTTCTATTGGTTTCAGAACCATAAGGCTAGGGAGAGACAAAAGCGTCGCAAGGTTGATAAGGATGTGATTCGTAGTGAAAActctatctccatcaattcttttacacaaaATTTTAATCAGCTATATCAGGTTTCTGAGCCCGAGAGGGTGATTGAGACTCTTCAGCTCTTCCCCTTGAATTCATTTGGTGAATCAGAATCAAAGAATATGAGGGTCCATGCAAGTGATCAATGCAGGGATAGCACTATGTTTTCATACACAGTGGGGGAACAAATGGATCACCCACCATTAGATCTTCGCTTGAGTTTTATGTGA 540 0.4093 MEEGMSEFFSSGVSVGGNSGSATTGTKCGRWNPTTEQVKVLTELFSSGLRTPSTDQIQKISNQLSFYGKIESKNVFYWFQNHKARERQKRRKVDKDVIRSENSISINSFTQNFNQLYQVSEPERVIETLQLFPLNSFGESESKNMRVHASDQCRDSTMFSYTVGEQMDHPPLDLRLSFM 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02298 179 CDD homeodomain 30 90 IPR001356 GO:0003677
Gma11g02298 179 PANTHER WUSCHEL-RELATED HOMEOBOX 7 1 168 - -
Gma11g02298 179 MobiDBLite consensus disorder prediction 11 29 - -
Gma11g02298 179 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 168 IPR044555 GO:0003700|GO:0099402
Gma11g02298 179 Pfam Homeodomain 28 88 IPR001356 GO:0003677
Gma11g02298 179 SUPERFAMILY Homeodomain-like 29 91 IPR009057 -
Gma11g02298 179 SMART HOX_1 26 93 IPR001356 GO:0003677
Gma11g02298 179 Gene3D - 27 94 - -
Gma11g02298 179 ProSiteProfiles 'Homeobox' domain profile. 24 89 IPR001356 GO:0003677
Gma11g02298 179 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02298 Gma-Chr11 38357954 38358743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02298 8 179 Wox Gene Family AT3G11260 56.831 4.60e-61 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma11g02298 Homeodomain 2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02298 - - gmx:100800233 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00275 18 2285415 2286142 Gma11g02298 11 38357954 38358743 ECH
Gma11g02298 11 38357954 38358743 Gma11g02298 11 38357954 38358743 ECH
Gma18g00275 18 2285415 2286142 Gma11g02298 11 38357954 38358743 GST
Gma11g02298 11 38357954 38358743 Gma02g02405 02 50128370 50129610 PCT
Gma02g02405 02 50128370 50129610 Gma11g02298 11 38357954 38358743 PCT