Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02297 ATGGAATTACCCCTTTACACTAGTTGCATCGTTGTTATGTTTACTATGTTGGACTTCCTATTTGAATTGCCCTTTGAAGAAGATGACAAGGATCCTAGCATCTGGTTTCTTGACCACAATTACCATGAATCTATGTTTTCCATGTTTAAAAGAATAAATGCAAAGGAGCATGTTGTGGGGTGGTATAGCACTGGTCCAAAGCTGCGCGAAAATGATCTTGACATTCACGGCTTATTTAATGACTATGTTCCAAATCCTGTCTTGGTTATAATTGATGTTGAACCTAAGGAATTGGGAATCCCAACAAAAGCATATTATGCCGTTGAAGAGGTTAAAGAGAATGCCACTCAAAAAAGTCAAAAAGTGTTTGTGCATGTGCCATCAGAGATTGCTGCTCATGAAGTTGAGGAAATAGGAGTGGAACACTTGCTTAGAGATGTGAAGGATACAACCATTAGCACCCTTGCAACAGAGGTAAGTGCAAAACTCACAGCTTTGAAGGGTTTGGATGCAAGACTTAAAGAGATCAGGAGTTACCTTGACCTTGTTATTGATGGAAAGCTTCCATTAAACCATGAGATCCTGTACCATCTGCAGGATGTGTTTAACCTGCTACCAAATCTTAATGTTGCTGATCTTATCAAGGCTTTCGCAGTGAAAACCAATGATATGATGCTGGTAATATACCTCTCGTCTCTCATTAGAAGTGTAATAGCACTCCACAACTTGATTAACAACAAGATGCTTAACAAGGAACATGAACGGGCAGAAGACTCGAAAACAGTTACAGTGCCAAGTGCAGCTGCATAA 810 0.3975 MELPLYTSCIVVMFTMLDFLFELPFEEDDKDPSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHGLFNDYVPNPVLVIIDVEPKELGIPTKAYYAVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVADLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHERAEDSKTVTVPSAAA 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02297 269 Pfam Maintenance of mitochondrial structure and function 134 245 IPR024969 -
Gma11g02297 269 PANTHER 26S PROTEASOME REGULATORY PARTICLE NON-ATPASE SUBUNIT 8 21 269 - -
Gma11g02297 269 CDD MPN_RPN7_8 21 255 IPR033858 GO:0005838
Gma11g02297 269 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 21 84 IPR000555 GO:0005515|GO:0008233|GO:0008237
Gma11g02297 269 SMART pad1_6 1 110 IPR000555 GO:0005515|GO:0008233|GO:0008237
Gma11g02297 269 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 21 269 - -
Gma11g02297 269 Gene3D Cytidine Deaminase, domain 2 19 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02297 Gma-Chr11 38351075 38353950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02297 37 208 Eukaryotic Initiation Factors Gene Family AT2G39990 24.571 8.22e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02297 K03038 - gmx:100790393 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00276 18 2288907 2292778 Gma11g02297 11 38351075 38353950 GST