Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02296 ATGTCTTCTTCTTCTTCTTCTCCTGCTGTTCTCTCAAAATGCACCGTTTTCCCTCACCGGAACTCCACTCTGGGGGACCTCAAGCTCTCTATCTCCGACCTTAACATGTTTTTATCTCACTACATCCAAAAAGGCTGTCTCTTCACCACTCCTTCACTTCCCTCTCACTCTCACACTCTCATCCCTCACCTCAAAAACGCGCTTTCCCAAACCCTCTCTCTCTTCCCTCCCCTCGCCGGCCGTCTCAAAACCGACACCGACGGCTTCGTTTACATCACATGCAACGACGCCGGCGTCGACTTCATCCACGCCACCGCCGCCGATATCTCCGTCGCAGACCTCCTCTCCCCGTCGTCTTCGTCTGATGTCCCTCCAATCTCCAAGCAACTCTTCCCCTTCCACCACAAAATCAGTTACACTGCTCATTCTTCCCCTATCATGGCCTTCCAGGTCACCGATCTCGCCGACGCCGTCTTCCTTGGCTGCGCCGTCTGCCACTCCGTCACCGACGGCGCCTCCTTCTGGAACTTCTTCAACACCTTCGCCGGAATCTCAAGAGGAGCCACCATCTCTCCCTCCAGCCTCCCCGATTTCCGCCGCGAGTCCATCCTCAGCTCCAACGTCGTGCTCCGCCTGCCAGAAGATATCAAGGTGACCTTTAATGTGGAGGAACCTTTTCGCGAGAGAATCTTCAGCTTCAGCCGCGAATCAATTCAGAAACTGAAAGCTACTGTGAACAAAAGCTTGACATTGTTTCCTCCGCCAGAGAACGGTGACGCGGTTGAGTTGATGGCGAAGATGAGCAGCGACACGCAACTGAGAACGGTTACAGAGATTTCGTCGTTTCAGTCGCTGTGCGCGCTGGTGTGGCGCTGCGTGACGAAGGCGCGAAATCTCGAGGGGTCGAAAACGACGACGTTTCGAATGGCAGTTAATGTTCGCCAACGCTTGGAGCCCAAGTTGGGGGACAGTTACTTCGGGAACGCGATTCAGAGCATTGCCACGTGCGCAGAAGCTGGTGATGTGGCGTCTAAGGAGCTTCGCTGGTGCGCGGAGCAGCTGAACAAAAGCGTGAAGGCCTTCGATGGTGCTACGGTGCGCCGTAACTTGGAGAATTGGGAGCGCGAGCCTAAGTGCTTCGAGTTGGGAAACCACGACGGCGCCACCGTGCAGATGGGAAGCTCGCCGAGGTTTCCGATGTACGACAATGATTTTGGATGGGGGCGGCCCTTAGCCGTGCGCAGCGGCGGAGCGAACAAGTTTGACGGCAAGATGTCGGCGTTTCCCGGGAGGAATGGCGGCGGCGCCATCGATTTGGAGGTGGTTTTGGCGCCGGAAACCATGGCGCGACTCGAGTCTGATTCTGAGTTCATGTTTTACGTGTCTGGTTGGTAG 1395 0.5591 MSSSSSSPAVLSKCTVFPHRNSTLGDLKLSISDLNMFLSHYIQKGCLFTTPSLPSHSHTLIPHLKNALSQTLSLFPPLAGRLKTDTDGFVYITCNDAGVDFIHATAADISVADLLSPSSSSDVPPISKQLFPFHHKISYTAHSSPIMAFQVTDLADAVFLGCAVCHSVTDGASFWNFFNTFAGISRGATISPSSLPDFRRESILSSNVVLRLPEDIKVTFNVEEPFRERIFSFSRESIQKLKATVNKSLTLFPPPENGDAVELMAKMSSDTQLRTVTEISSFQSLCALVWRCVTKARNLEGSKTTTFRMAVNVRQRLEPKLGDSYFGNAIQSIATCAEAGDVASKELRWCAEQLNKSVKAFDGATVRRNLENWEREPKCFELGNHDGATVQMGSSPRFPMYDNDFGWGRPLAVRSGGANKFDGKMSAFPGRNGGGAIDLEVVLAPETMARLESDSEFMFYVSGW 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02296 464 Pfam Transferase family 11 458 - -
Gma11g02296 464 Gene3D - 8 218 IPR023213 -
Gma11g02296 464 Gene3D - 219 453 IPR023213 -
Gma11g02296 464 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 462 - -
Gma11g02296 464 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02296 Gma-Chr11 38338987 38340562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02296 64 461 Monolignol Biosynthesis Gene Families AT5G48930 30.260 6.43e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02296 - - gmx:100799704 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00277 18 2299047 2305681 Gma11g02296 11 38338987 38340562 ECH
Gma11g02296 11 38338987 38340562 Gma11g02296 11 38338987 38340562 ECH
Gma14g00524 14 5004622 5006067 Gma11g02296 11 38338987 38340562 PCT
Gma02g02403 02 50115096 50116939 Gma11g02296 11 38338987 38340562 PCT