Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02260 ATGAAGGCACTAATTCTTGTTGGAGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGTGTTCCCAAGCCTCTTGTTGATTTTGCTAACAAGCCCATGATTCTTCATCAGATAGAGGCTCTCAAGGCCATTGGCGTCAATGAAGTGGTGCTAGCTATCAATTACCAACCAGAGGTCATGTTGAATTTCTTGAAAGAGTTTGAGACAAAGCTTGGTATCAAAATCACTTGTTCTCAAGAAACTGAACCGCTAGGTACTGCAGGCCCCTTGGCTCTTGCGAGGGATAAGCTAATAAGTGACTCTGGAGAGCCATTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTACCCACTTAAAGAAATGATTCAATTCCACaaaacacacggaggagaggctaccataatggtgacaaagGTCGATGAGCCATCAAAATATGGTGTGGTTGTGATGGAGGAGACTACCGGGCAGGTTGAGAGATTTGTAGAGAAACCAAAGTTGTTTGTTGGCAACAAAATCAATGCTGGAATCTACCTATTGAACCCCTCAGTTTTGGATCGAATTGAACTGAGGCCCACTTCTATCGAGAAAGAGGTGTTTCCAAAGATTGCAGCAGATAAAAAGCTATATGCAATGGTCCTGCCAGGATTCTGGATGGACATTGGACAACCAAAGGACTATATTTCTGGCCTGACACTTTACCTGGACTCGCTGAGGAAAAAGTCTCCTTCTAAACTGGCCAGTGGTCCTCACTTTGTGGGGAATGTCATTGTGCATGAAACTGCCACTATTGGTGAGGGATGTCTCATTGGACCTGATGTTGCCATTGGTCCTGGCTGTGTTGTTGACTCAGGTGTCAGGCTTTCACGCTGCACAGTTATGCGAGGAGTTCGGATTAAAAAGCATACTTGCATATCCAACAGTATCATTGGGTGGCATTCCACTGTTGGGCAATGGGCCCGTGTGGAGAATATGACTATCCTTGGAGAAGATGTTCATGTTTGTGATGAAGTTTACAGCAATGGTGGCGTAGTTTTGCCTCACAAGGAGATCAAGTCAAACATTCTGAAGCCAGAGATAGTCATGTGA 1086 0.4291 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAIGVNEVVLAINYQPEVMLNFLKEFETKLGIKITCSQETEPLGTAGPLALARDKLISDSGEPFFVLNSDVISEYPLKEMIQFHKTHGGEATIMVTKVDEPSKYGVVVMEETTGQVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEVFPKIAADKKLYAMVLPGFWMDIGQPKDYISGLTLYLDSLRKKSPSKLASGPHFVGNVIVHETATIGEGCLIGPDVAIGPGCVVDSGVRLSRCTVMRGVRIKKHTCISNSIIGWHSTVGQWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSNILKPEIVM 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02260 361 Pfam Bacterial transferase hexapeptide (six repeats) 261 295 IPR001451 -
Gma11g02260 361 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE FAMILY PROTEIN-RELATED 1 361 - -
Gma11g02260 361 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 312 IPR029044 -
Gma11g02260 361 Gene3D Hexapeptide repeat proteins 237 358 - -
Gma11g02260 361 Pfam Nucleotidyl transferase 2 229 IPR005835 GO:0009058|GO:0016779
Gma11g02260 361 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 231 IPR029044 -
Gma11g02260 361 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 361 - -
Gma11g02260 361 CDD M1P_guanylylT_B_like_N 1 234 IPR045233 GO:0004475|GO:0005525|GO:0009298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02260 Gma-Chr11 37916693 37918671 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02260 1 185 Eukaryotic Initiation Factors Gene Family AT4G18300 24.121 5.82e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02260 K00966 - gmx:100779367 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00324 18 2683629 2689019 Gma11g02260 11 37916693 37918671 GST
Gma11g02260 11 37916693 37918671 Gma14g00562 14 5395016 5398297 PCT
Gma11g02260 11 37916693 37918671 Gma02g02369 02 49771196 49774209 PCT
Gma14g00562 14 5395016 5398297 Gma11g02260 11 37916693 37918671 PCT
Gma02g02369 02 49771196 49774209 Gma11g02260 11 37916693 37918671 PCT