Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02255 ATGAATGGCGAGGGGAGTGAAGCAATGCAAGTGGAGATGGAGATTGAGAAGGAGAGGTTGGTGTACATGTGGGGTTACCTTCCCGGAGCTCTGCCGCAGAGGACGCCACTGTTGACGCCGGTTCTCGTTAGGGTTCCGCCCTCTGGTTACTCTTGGAAGGATGTTTGCGGTGGTGGTTGTGGATTCGCCATGGCTATCTCTGAGCCTGGAAAGCTCATAACATGGGGTTCAACAGATGATTTAGGCCAAAGCTATGTTACATCTGGCAAACATGGGGAAATTCCAGAGCCTTTCCCTCTTCCAACTGAAGTGACTATTGTAAAAGCTGCAGCTGGATGGGCACATTGTGTTTCTGTGACAGATTGTGGAGAAGTTTACACATGGGGATGGAGGGAATGTGTACCCTCTGGGAAGGTGTTTGGTGAATCATTAACTGGGGTAAGCCCCGAAAAGGATGTACCAGGAAGGCAAAGTTCATTCTTGACTGAGCAAGTGAGCCCTCGTTCTCAAGGCTCAAAATCTACTGGAGGAACTGCCTCTGGTACCAGTGGAGAAGAAAGTTCAAAGAGAAGAAGAGTATCTTCAGCAAAGCAAACAGCCGAAACCTCATCATCTAGTGATGATACTCAGACAGCATTGCCATGTCTTGTCACACTCAATCCAGGTGTAAGGATAGCAAGTGTAGCTGCTGGTGGTCGCCATACCTTAGCATTGTCAGATATAGGACAGGTGTGGGGTTGGGGCTATGGTGGTGAAGGGCAGCTTGGTTTGGGTTCTAGAATACGAATGGTGTCCTCTCCTCATCTAGTTCCTTGTATTAATTCCTCTTCTTATGGTAAAGATATATCAGCATCATTGGCTCGAGGAAGCATGAGTTCAGATGGGCAAAATTTCAGAGTTCCTGGAAGTTATATAAAGGGAATTGCCTGCGGAGGTCGACACAGTGCAGTAATCACAGATGCTGGAGCTGTGCTTACGTTTGGTTGGGGACTTTATGGACAGTGTGGGCAAGGAAGTACAGATGATGAATTAAGCCCGAATTGCGTATCTTCCTTATTGGGTATTCGAATAGAGGGAGTTGCTGCAGGACTGTGGCATACTGTGTGTACATCTGCTGATGGTGATGTATATGCATTTGGTGGAAACCAGTTTGGGCAGCTGGGAACTGGTGGTGATCAAGCTGAGACTATACCAAGGCTCTTGGATTGTCCGAGCTTGGAAAATGTGAACGTAAAAAGGATATCTTGTGGGGCTCGTCACACTGCTCTAATAACAGATAATGGAAAAGTCTTCTGCTGGGGATGGAACAAGTATGGACAGCTTGGCCTTGGGGACGTGATAGACCGTAACATTCCTTCTGAAGTTACCATCGAAGGTTGTGTAGCTAAAAACGTTGCATGTGGCTGGTGGCATACTCTTCTTCTGGCCGAGCCACCCACTTGA 1443 0.4768 MNGEGSEAMQVEMEIEKERLVYMWGYLPGALPQRTPLLTPVLVRVPPSGYSWKDVCGGGCGFAMAISEPGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEVTIVKAAAGWAHCVSVTDCGEVYTWGWRECVPSGKVFGESLTGVSPEKDVPGRQSSFLTEQVSPRSQGSKSTGGTASGTSGEESSKRRRVSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCINSSSYGKDISASLARGSMSSDGQNFRVPGSYIKGIACGGRHSAVITDAGAVLTFGWGLYGQCGQGSTDDELSPNCVSSLLGIRIEGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGGDQAETIPRLLDCPSLENVNVKRISCGARHTALITDNGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVAKNVACGWWHTLLLAEPPT 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02255 480 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 308 318 IPR000408 -
Gma11g02255 480 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 322 373 IPR000408 -
Gma11g02255 480 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 242 321 IPR000408 -
Gma11g02255 480 PRINTS Chromosome condensation regulator RCC1 signature 106 119 IPR000408 -
Gma11g02255 480 PRINTS Chromosome condensation regulator RCC1 signature 228 244 IPR000408 -
Gma11g02255 480 PRINTS Chromosome condensation regulator RCC1 signature 363 381 IPR000408 -
Gma11g02255 480 PRINTS Chromosome condensation regulator RCC1 signature 423 444 IPR000408 -
Gma11g02255 480 SUPERFAMILY RCC1/BLIP-II 21 478 IPR009091 -
Gma11g02255 480 Pfam Regulator of chromosome condensation (RCC1) repeat 225 254 - -
Gma11g02255 480 Gene3D - 15 152 IPR009091 -
Gma11g02255 480 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 428 478 IPR000408 -
Gma11g02255 480 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 228 238 IPR000408 -
Gma11g02255 480 Gene3D - 289 477 IPR009091 -
Gma11g02255 480 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 414 424 IPR000408 -
Gma11g02255 480 MobiDBLite consensus disorder prediction 155 184 - -
Gma11g02255 480 Gene3D - 181 288 IPR009091 -
Gma11g02255 480 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 14 479 - -
Gma11g02255 480 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 374 427 IPR000408 -
Gma11g02255 480 MobiDBLite consensus disorder prediction 145 210 - -
Gma11g02255 480 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 70 122 IPR000408 -
Gma11g02255 480 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN 14 479 - -
Gma11g02255 480 Pfam Regulator of chromosome condensation (RCC1) repeat 427 475 IPR000408 -
Gma11g02255 480 Pfam Regulator of chromosome condensation (RCC1) repeat 322 369 IPR000408 -
Gma11g02255 480 Pfam Regulator of chromosome condensation (RCC1) repeat 373 424 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02255 Gma-Chr11 37868249 37874616 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02255 - - gmx:100778841 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00326 18 2703345 2713294 Gma11g02255 11 37868249 37874616 ECH
Gma11g02255 11 37868249 37874616 Gma11g02255 11 37868249 37874616 ECH
Gma18g00326 18 2703345 2713294 Gma11g02255 11 37868249 37874616 GST
Gma11g02255 11 37868249 37874616 Gma14g00563 14 5405263 5410464 PCT
Gma11g02255 11 37868249 37874616 Gma02g02368 02 49759522 49764761 PCT
Gma14g00563 14 5405263 5410464 Gma11g02255 11 37868249 37874616 PCT
Gma02g02368 02 49759522 49764761 Gma11g02255 11 37868249 37874616 PCT