Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02254 ATGGCGGAATTGGAGGAGGAGCGGATGGGAGGGGATTTCAAGCCCTTCTCGGAGGGCTCTTCGTGCTCGCGTTCGATCAGCGAAACCGTGAACGGCTCGCACCAATTCACAATAAAGGGTTACTCTTTGGCCAAAGGGATGGGCGCGGGAAAGTACATCATGAGCGACACTTTCACCGTTGGTGGTTACGATTGGGCTATTTACTTCTACCCTGATGGGAAGAACCCTGAGGACAATTCCATGTACGTTTCGGTCTTTATTGCGCTCGCTAGCGACGGAACCGATGTTAGGGCTCTCTTCAAGTTGACGCTGGTGGACCAGAGTGAGAAGGGGAATGATAAAGTTCATAGCCATTTCGATCGCCCTCTAGAGAGTGGACCTTATACCTTGAAGTATAAAGGCAGCATGTGGGGTTACAAACGCTTCTTCAGAAGATCACTACTGGAAAATTCACTGTATCTAAAAAATGATTGCCTTGTCATGCATTGCACTGTTGGGGTCGTTAAAACTCGTTTTGAGGGATCTAAACAGGGTGTTATCGTGCCACAGTCAGACATGGGCCGAGATTTTAAGGACTTGTTGGAATCTGAGGTTGGTTGTGACATAGTTTTCAAGGTCAAAAGTGAAAGCTTCAAAGCTCATAAGTTGATACTTGCAGCCCGATCTCCTGTGTTTAGAGCGCAGTTTTTTGGGCTTGTTGGGGATCCTACCTTAGAGGAAGTAGTGGTAGAGGATATTGAGCCCTTTATCTTCAAGGCAATGCTTCTCTTCATCTACTCTGACAAACTTCCTGGCATATATGAGGTTATGGACTCGATGCCCCTGTGCTCATACACTGTCATGGTGCAGCATCTCTTGGCTGCTGCTGATCTCTATAATCTTGATCGGCTCAAACTGCTTTGTGAATCAAAATTATGTGAAGAAATCAATACTGACAATGTGGCCACAACACTTGCGCTGGCAGAGCAACACCACTGTCCACAGCTTAAGGCAATCTGTTTAAAATTTATTGCAAATCCTGCAAACTTGGGAGCTGTAATGCAGTCGGAAGCTTTTGTGCATTTGAAAGAGAGCTGCCCCTCAATGCTGTTGGAATTGCTGGAGACATTTGCATCAGTGGATGATAACTCAGGCCAGACATTAAGCAGAAAGAGAAGTGGCAGTAGCATATATGGTCAAGATTTAGCAGATGGGGCAGCTGCTGAATCAGTTAATCCGAATGGCAGGCGAGTAAGGAGGCGGACATAA 1248 0.4639 MAELEEERMGGDFKPFSEGSSCSRSISETVNGSHQFTIKGYSLAKGMGAGKYIMSDTFTVGGYDWAIYFYPDGKNPEDNSMYVSVFIALASDGTDVRALFKLTLVDQSEKGNDKVHSHFDRPLESGPYTLKYKGSMWGYKRFFRRSLLENSLYLKNDCLVMHCTVGVVKTRFEGSKQGVIVPQSDMGRDFKDLLESEVGCDIVFKVKSESFKAHKLILAARSPVFRAQFFGLVGDPTLEEVVVEDIEPFIFKAMLLFIYSDKLPGIYEVMDSMPLCSYTVMVQHLLAAADLYNLDRLKLLCESKLCEEINTDNVATTLALAEQHHCPQLKAICLKFIANPANLGAVMQSEAFVHLKESCPSMLLELLETFASVDDNSGQTLSRKRSGSSIYGQDLADGAAAESVNPNGRRVRRRT 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02254 415 CDD BACK_AtBPM-like 306 369 IPR034090 -
Gma11g02254 415 CDD BTB_POZ_BPM_plant 186 306 - -
Gma11g02254 415 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 19 380 IPR045005 GO:0016567
Gma11g02254 415 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 3 19 380 - -
Gma11g02254 415 SMART BTB_4 200 309 IPR000210 GO:0005515
Gma11g02254 415 Gene3D - 308 389 - -
Gma11g02254 415 SMART math_3 36 148 IPR002083 GO:0005515
Gma11g02254 415 Gene3D Potassium Channel Kv1.1; Chain A 176 304 IPR011333 -
Gma11g02254 415 ProSiteProfiles MATH/TRAF domain profile. 31 165 IPR002083 GO:0005515
Gma11g02254 415 SUPERFAMILY POZ domain 182 307 IPR011333 -
Gma11g02254 415 MobiDBLite consensus disorder prediction 1 27 - -
Gma11g02254 415 SUPERFAMILY TRAF domain-like 28 170 - -
Gma11g02254 415 Pfam BTB/POZ domain 190 307 IPR000210 GO:0005515
Gma11g02254 415 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 30 170 IPR008974 GO:0005515
Gma11g02254 415 CDD MATH 32 165 IPR002083 GO:0005515
Gma11g02254 415 ProSiteProfiles BTB domain profile. 200 263 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02254 Gma-Chr11 37858618 37863752 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00327 18 2720018 2725702 Gma11g02254 11 37858618 37863752 ECH
Gma03g01899 03 44902240 44906274 Gma11g02254 11 37858618 37863752 ECH
Gma19g01941 19 48552265 48556472 Gma11g02254 11 37858618 37863752 ECH
Gma11g02254 11 37858618 37863752 Gma11g02254 11 37858618 37863752 ECH
Gma18g00327 18 2720018 2725702 Gma11g02254 11 37858618 37863752 GST