Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02250 ATGGCTGGAATTTGCTGTGGTGTTGTCGGAGAAGGTGACACTCCGGCTCCACTCGAGCCAACTACTCGCCCCTCCAGGCGCCGGAGTTTGGACATCTTACCCTTAAAATACATCGCTGACATGGCGGTGCCGCCGTCGGATGGTTCACGGAAACGTCCCAAGCTGGATCTCAGGGACCGCGATAACGTAGTTCAAAATTGCGACGAATCCACTGGACACAAGGTGGTGAAAAAAGAAGCCAAAGTGGAAATCCACGACAATATTTCCGAAACGAAAAACGTAACTGTTGCGGATGCTTCGGAAGTTGAAGATTCTCCTAAGTTCGGCGTGACGTCAGTTTGCGGCAGGAGAAGAGACATGGAAGATTCCGTTTCGGTGCGGCCTTCCTTCACCCAAGGCTTCCACTACTTTGGCGTTTTCGACGGTCACGGTTGCTCTCATGTCGCGACTATGTGCAAGGAGCGGTTACACGAGATCGTGAATGAAGAGATTGACAGCGCGCGCGAGAATTTGGAGTGGAAGCTGACGATGGAGAACGGATTCGCTCGCATGGACGACGAGGTTAATCGCAGGAGCCAGAGCAACCAGACCTTCACCTGCAGGTGCGAGCTCCAGACTCCCCACTGCGACGCCGTCGGATCCACCGCCGTCGTCGCCATCGTCACGCCGGACAAACTCGTCGTTTCCAACTGCGGCGACTCCCGCGCCGTCCTCTGCCGGAAAGGCGTAGCCATCCCTCTCTCCTCCGATCACAAGCCGGATCGACCCGACGAACTGCTCCGAGTCCAATCCAAGGGAGGGCGCGTGATTTACTGGGACGGTCCCAGAGTGCTTGGTGTGTTAGCCATGTCTCGAGCCATAGGTGACAATTATCTGAAGCCGTACGTGATTTCTGAACCGGAGGTGACGGTGACGGAGCGGACGGAGGAGGACGAGTGTTTGATACTGGCGAGTGATGGGTTGTGGGATGTGGTGTCGAATGAAACCGCATGTGGTGTGGTGAGGATGTGCCTCAAGGCGCAGAAGCCGCCGTCGCCGCCGGGATCTCCGGGGAGTGACGTGGCGGCGGACGGTTCCGACCGGGCTTGCTCCGATGCGTCGATTTTGTTAACCAAGTTAGCGTTGGCGAGGCATAGTTCGGATAATGTGAGCGTGGTGGTGGTTGATTTGAGGAGAGATCAACGACAATCATCAAACTCCAATTAA 1206 0.5597 MAGICCGVVGEGDTPAPLEPTTRPSRRRSLDILPLKYIADMAVPPSDGSRKRPKLDLRDRDNVVQNCDESTGHKVVKKEAKVEIHDNISETKNVTVADASEVEDSPKFGVTSVCGRRRDMEDSVSVRPSFTQGFHYFGVFDGHGCSHVATMCKERLHEIVNEEIDSARENLEWKLTMENGFARMDDEVNRRSQSNQTFTCRCELQTPHCDAVGSTAVVAIVTPDKLVVSNCGDSRAVLCRKGVAIPLSSDHKPDRPDELLRVQSKGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTEEDECLILASDGLWDVVSNETACGVVRMCLKAQKPPSPPGSPGSDVAADGSDRACSDASILLTKLALARHSSDNVSVVVVDLRRDQRQSSNSN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02250 401 SMART PP2C_4 95 388 IPR001932 -
Gma11g02250 401 SMART PP2C_SIG_2 121 390 IPR001932 -
Gma11g02250 401 PANTHER ALPHABET, ISOFORM E-RELATED 30 395 - -
Gma11g02250 401 ProSitePatterns PPM-type phosphatase domain signature. 136 144 IPR000222 GO:0043169
Gma11g02250 401 Gene3D - 102 400 IPR036457 -
Gma11g02250 401 ProSiteProfiles PPM-type phosphatase domain profile. 107 390 IPR001932 -
Gma11g02250 401 SUPERFAMILY PP2C-like 106 391 IPR036457 -
Gma11g02250 401 CDD PP2Cc 107 339 IPR001932 -
Gma11g02250 401 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 30 395 - -
Gma11g02250 401 Pfam Protein phosphatase 2C 108 382 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02250 Gma-Chr11 37825143 37827221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02250 1 400 PP2C-type Phosphatase Gene Family AT3G11410 58.937 2.35e-145 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02250 K14497 - gmx:100776356 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00330 18 2757841 2760096 Gma11g02250 11 37825143 37827221 ECH
Gma11g02250 11 37825143 37827221 Gma11g02250 11 37825143 37827221 ECH
Gma18g00330 18 2757841 2760096 Gma11g02250 11 37825143 37827221 GST
Gma11g02250 11 37825143 37827221 Gma14g00570 14 5455399 5457703 PCT
Gma11g02250 11 37825143 37827221 Gma02g02364 02 49716591 49718694 PCT
Gma14g00570 14 5455399 5457703 Gma11g02250 11 37825143 37827221 PCT
Gma02g02364 02 49716591 49718694 Gma11g02250 11 37825143 37827221 PCT