Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02237 ATGGCGAATCGATGGTGGACTGGGAATGTGGGAATGATAAGAGAGCAAGAGTTGATGGAGAACAGCAACAACAACAACGCTACTACTACACCGACGAATAGCAGCAACAGCAACACTAATGCGAACACAAACACGACCGAGGAAGAGGTGAGCAGGGACAACGGAGAGGACCTGCAGAACCAAAACCTCGGAAGCCACGAAGGCTCGGAGCCAGGAAGCAGCGGTCGGAGGCCACGTGGCAGGCCACCTGGGTCCAAGAACAAGCCCAAGCCGCCCATAGTCATAACCAAGGAAAGTCCCAACGCACTCCGAAGCCACGTCCTGGAAATCACCTCCGGCAGTGACGTTGCTGAGAGCATCGCCGCCTTTGCCAACCGCCGCCACCGCGGCGTGTCGGTGCTCAGCGGGAGTGGCATTGTTGCCAACGTCACTCTCCGCCAGCCTGCCGCCCCGGCCGGCGTCATAACGCTCCATGGGAGGTTCGAGATACTGTCCCTCTCGGGAGCCTTTTTGCCGTCCCCCTCGCCGCCGGGAGCCACGGGACTAACTGTCTATTTGGCTGGCGGGCAGGGGCAGGTTGTCGGTGGCACTGTCGCCGGCTCGCTCGTTGCCTCCGGGCCCGTGATGGTGATCGCCGCCACTTTTGCTAATGCCACCTATGAGAGGTTGCCACTGGAGGATGAACAAGGTGAGGAGGGAATGCAAGTGCAAcagcagcagcagcagcagcagcagcaACAATCTCAAGGTTTGGGTGAACAGGTTTCAATGCCTATGTATAATTTGCCTCCTAATTTGCTACACAATGGTCAGAACATGCCTCATGATGTGCTTTGGGGAGCTCCACCTCGCCCTCCTCCTTCCTTCTAA 870 0.5598 MANRWWTGNVGMIREQELMENSNNNNATTTPTNSSNSNTNANTNTTEEEVSRDNGEDLQNQNLGSHEGSEPGSSGRRPRGRPPGSKNKPKPPIVITKESPNALRSHVLEITSGSDVAESIAAFANRRHRGVSVLSGSGIVANVTLRQPAAPAGVITLHGRFEILSLSGAFLPSPSPPGATGLTVYLAGGQGQVVGGTVAGSLVASGPVMVIAATFANATYERLPLEDEQGEEGMQVQQQQQQQQQQQSQGLGEQVSMPMYNLPPNLLHNGQNMPHDVLWGAPPRPPPSF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02237 289 MobiDBLite consensus disorder prediction 228 289 - -
Gma11g02237 289 MobiDBLite consensus disorder prediction 22 48 - -
Gma11g02237 289 PIRSF ESCAROLA 14 288 IPR014476 GO:0003680
Gma11g02237 289 CDD DUF296 104 215 IPR005175 -
Gma11g02237 289 MobiDBLite consensus disorder prediction 232 255 - -
Gma11g02237 289 SUPERFAMILY AF0104/ALDC/Ptd012-like 100 228 - -
Gma11g02237 289 Gene3D - 103 245 - -
Gma11g02237 289 Pfam Plants and Prokaryotes Conserved (PCC) domain 104 216 IPR005175 -
Gma11g02237 289 ProSiteProfiles PPC domain profile profile. 100 237 IPR005175 -
Gma11g02237 289 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 21 285 IPR014476 GO:0003680
Gma11g02237 289 MobiDBLite consensus disorder prediction 22 100 - -
Gma11g02237 289 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 21 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02237 Gma-Chr11 37691837 37698107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02237 1 289 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 54.890 1.48e-77 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02237 - - gmx:102667174 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02237 11 37691837 37698107 Gma11g02237 11 37691837 37698107 ECH
Gma18g00341 18 2864801 2865871 Gma11g02237 11 37691837 37698107 GST