Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02228 ATGTTCTCCATTCTCCTCCTCCTTCTTCCTCCTCTAACAATCACTCTTTTCACCGTTTTCCTCCAAATCCAAACCACCTCTTCTCTCTCCTCTTCCCTCCAAACCCCTCTCATATTGCCTCTTAAAACACAAACACTCCCATATGGCTTAGTTTCACTTCCAACACCATCGTCCACACGTAAGGTCTCATTCTACCACAACGTAACCTTAACCGTTTCACTAACCGTAGGCACGCCCCCACAGAGCGTTACCATGGTCCTCGACACAGGCAGCGAGCTCTCCTGGCTCCACTGCAAAAAACAACAAAACATTAACTCAGTTTTCAACCCACATCTATCTTCCTCCTACACCCCAATACCATGCATGTCTCCTATCTGCAAGACTCGAACTCGAGACTTTTTGATACCCGTTTCGTGCGACTCAAATAACCTCTGCCACGTCACCGTCTCCTACGCCGACTTCACCTCCTTGGAGGGCAACCTCGCCTCAGACACGTTCGCCATATCCGGGTCGGGTCAACCGGGAATTATATTCGGGAGCATGGATTCCGGGTTCAGCTCCAACGCAAACGAAGACTCCAAAACAACCGGGTTAATGGGCATGAACCGAGGGTCGCTCTCGTTTGTGACCCAAATGGGGTTTCCGAAATTCTCGTACTGCATCTCCGGCAAAGATGCTTCCGGCGTGTTACTCTTCGGCGACGCCACGTTCAAGTGGCTTGGACCGTTAAAGTACACTCCTTTGGTGAAAATGAATACCCCATTACCCTACTTCGACCGGGTCGCGTACACGGTTCGGTTAATGGGCATTCGGGTCGGGTCAAAACCGCTACAGGTTCCAAAGGAAATCTTCGCGCCAGATCATACCGGGGCGGGTCAGACAATGGTTGATTCGGGTACTCGATTCACTTTTCTTCTCGGTTCGGTTTACACTGCTTTGAGGAACGAGTTTGTGGCGCAGACGAGAGGGGTGTTGACCCTTTTGGAGGATCCGAATTTCGTGTTTGAAGGGGCGATGGATCTGTGCTTTAGGGTTAGAAGAGGGGGTGTTGTGCCGGCGGTGCCGGCGGTGACGATGGTGTTTGAAGGGGCGGAGATGAGTGTTTCCGGTGAGAGGTTACTGTATCGGGTGGGGGGTGATGGTGACGTGGCGAAAGGGAATGGTGACGTGTACTGTTTGACGTTTGGGAATTCGGACTTGTTAGGGATTGAGGCTTACGTGATTGGACACCATCATCAGCAAAACGTGTGGATGGAGTTTGACTTGGTCAACTCCAGGGTTGGATTTGCTGACACCAAGTGTGAACTTGCCAGTCGAAGACTTGGTTTGGATTCATAA 1338 0.5105 MFSILLLLLPPLTITLFTVFLQIQTTSSLSSSLQTPLILPLKTQTLPYGLVSLPTPSSTRKVSFYHNVTLTVSLTVGTPPQSVTMVLDTGSELSWLHCKKQQNINSVFNPHLSSSYTPIPCMSPICKTRTRDFLIPVSCDSNNLCHVTVSYADFTSLEGNLASDTFAISGSGQPGIIFGSMDSGFSSNANEDSKTTGLMGMNRGSLSFVTQMGFPKFSYCISGKDASGVLLFGDATFKWLGPLKYTPLVKMNTPLPYFDRVAYTVRLMGIRVGSKPLQVPKEIFAPDHTGAGQTMVDSGTRFTFLLGSVYTALRNEFVAQTRGVLTLLEDPNFVFEGAMDLCFRVRRGGVVPAVPAVTMVFEGAEMSVSGERLLYRVGGDGDVAKGNGDVYCLTFGNSDLLGIEAYVIGHHHQQNVWMEFDLVNSRVGFADTKCELASRRLGLDS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02228 445 Gene3D Acid Proteases 240 438 IPR021109 -
Gma11g02228 445 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 85 96 IPR001969 GO:0004190|GO:0006508
Gma11g02228 445 CDD pepsin_A_like_plant 69 434 IPR034161 -
Gma11g02228 445 Pfam Xylanase inhibitor C-terminal 262 430 IPR032799 -
Gma11g02228 445 PANTHER ASPARTYL PROTEASE-RELATED 14 443 IPR001461 GO:0004190|GO:0006508
Gma11g02228 445 ProSiteProfiles Peptidase family A1 domain profile. 70 430 IPR033121 -
Gma11g02228 445 Pfam Xylanase inhibitor N-terminal 71 234 IPR032861 -
Gma11g02228 445 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 14 443 - -
Gma11g02228 445 SUPERFAMILY Acid proteases 65 434 IPR021109 -
Gma11g02228 445 Gene3D Acid Proteases 59 233 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02228 Gma-Chr11 37612954 37614726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02228 71 435 Miscellaneous Gene Families AT1G44130 25.065 2.80e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02228 - - gmx:100783835 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00348 18 2931111 2932612 Gma11g02228 11 37612954 37614726 ECH
Gma18g01687 18 47332210 47333637 Gma11g02228 11 37612954 37614726 ECH
Gma07g01252 07 16295225 16296148 Gma11g02228 11 37612954 37614726 ECH
Gma11g02228 11 37612954 37614726 Gma11g02228 11 37612954 37614726 ECH
Gma18g00349 18 2938996 2943294 Gma11g02228 11 37612954 37614726 GST