Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02223 ATGACTTTAAGCAAAAGAATGGTAAGCTTCATAACTTTTACTTGTTTCTTGCACCTAACAAAGCCTTCAAACTTGAGGGAAGACACGTTGCTCCAAGGCCATCAACTTGGATCAACCAACCGTTTGATTTCTCCTTCAGGTTTATACACACTGCGTTTCTTTCAGCTTGATGATGGCTCTGACGCTAACAGCAAATTCTACCTTGGCGTATCAGCCAATAAATTCCACTACTACgtttgggttgccaacagagataatccaatccacgacgaccctggagttctcactattgatgaattttccaacctgaaaattctgtctagtactaccactatgatgctatattcagttgaagcagaaaatactaacaaaagtgttcgtgccactttgctagacacaggaaactttgtgcttcatgagttgaacccagatggaatatctgtgaagagggtgttatggcagagttttgattaccccacagacacaattttaccagggatgaagcttggctatgacaagaaCACTGGTCATACTTGGTCTATAACAGCAAGGAGAAGTTATAGAACTCTTTGGTCAGGGTCTTTCTCTCTCAGCCTTGATCCCAAAACTAACCAATTGGTTAGTAGGTGGAGAGAGGCAATCATATGGAGCAGTGGAGAATGGAGAAATGGAAGCTTTAGCAACTTGAACTCTTCATCACTTTACAAGGAGAACTTCAATTTCACTTTCTTTTCAAATGAAAGTGTGACTTACTTTGAATATGCTTCAGTTTCTGGTTATTTCACCATGGAGCCATTGGGTAGATTGAATGCTAGTGGTGCCGCTTACTCATGCGTTGATATTGAGATTGTCCCTGGTTGTACAATGCCACGGCCTCCCAAATGCAGGGAAGATGATGATTTGTACTTGCCCAATTGGAATAGCTTAGGAGCAATGTCAAGGAGAGGATTCATATTTGATGAAAGAGAGAACTTGACTATTTCTGATTGCTGGATGAAGTGCTTGAAAAATTGCTCATGTGTGGCCTACACTTATGCAAAGGAGGATGCAACTGGCTGCGAGATATGGAGCAGAGACGACACATCATATTTTGTTGAGACTAATTCCGGTGTTGGTCGTCCAATTTTCTTCTTTCAGACTGAAACCAAAGCTATCGAAAAACGTAAGAAACGAGCAAGTCTCTTCTATGACACTGAAATTTCTGTTGCATACGATGAAGGAAGAGAACAATGGAATGAGAAGAGGACAGGTAATGATGCACATATATTCGACTTAATAACCATTCTAGAGGCAACCGACAATTTCTCCTTCAcaaataagattggggagggtggctttggacctgtttacaaggggaaattgtcaaatggccaagaaatagctataaagagactttccaaaagctcaggacaaggattggtagagttcaaaaatgaagctatgttaatcgtgaaactccagcacactaatctagtgaggcttttaggtttttgcagtgacagagaagaaaggatattagtctacgaatacatgtccaacaaaagtttgaatttatatctttttgactccaccaaaagaaatgtgttagaatggaagacaagatacaggattatccaaggagttgcgcaagggcttgtatatttacatcaatattcaagattaaaagtgatacatagagacttgaaagctagcaacattttattggacaatgagttgaatccaaagatatcagattttggaatggctcgaatatttaaattgacacaatctgaagaaaaaacaaatagggttgttgggacatatggttatatgtctcctgagtacgccatgagtggagtcatctcaaccaaaactgatgatatgcatggaaattatggaatcaaggagaagctctaa 1896 0.2215 MTLSKRMVSFITFTCFLHLTKPSNLREDTLLQGHQLGSTNRLISPSGLYTLRFFQLDDGSDANSKFYLGVSANKFHYYVWVANRDNPIHDDPGVLTIDEFSNLKILSSTTTMMLYSVEAENTNKSVRATLLDTGNFVLHELNPDGISVKRVLWQSFDYPTDTILPGMKLGYDKNTGHTWSITARRSYRTLWSGSFSLSLDPKTNQLVSRWREAIIWSSGEWRNGSFSNLNSSSLYKENFNFTFFSNESVTYFEYASVSGYFTMEPLGRLNASGAAYSCVDIEIVPGCTMPRPPKCREDDDLYLPNWNSLGAMSRRGFIFDERENLTISDCWMKCLKNCSCVAYTYAKEDATGCEIWSRDDTSYFVETNSGVGRPIFFFQTETKAIEKRKKRASLFYDTEISVAYDEGREQWNEKRTGNDAHIFDLITILEATDNFSFTNKIGEGGFGPVYKGKLSNGQEIAIKRLSKSSGQGLVEFKNEAMLIVKLQHTNLVRLLGFCSDREERILVYEYMSNKSLNLYLFDSTKRNVLEWKTRYRIIQGVAQGLVYLHQYSRLKVIHRDLKASNILLDNELNPKISDFGMARIFKLTQSEEKTNRVVGTYGYMSPEYAMSGVISTKTDDMHGNYGIKEKL 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02223 631 Gene3D Transferase(Phosphotransferase) domain 1 511 620 - -
Gma11g02223 631 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 76 619 - -
Gma11g02223 631 SUPERFAMILY Protein kinase-like (PK-like) 421 619 IPR011009 -
Gma11g02223 631 Gene3D Phosphorylase Kinase; domain 1 399 510 - -
Gma11g02223 631 Pfam D-mannose binding lectin 78 185 IPR001480 -
Gma11g02223 631 Pfam Protein kinase domain 437 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02223 631 ProSiteProfiles Bulb-type lectin domain profile. 27 151 IPR001480 -
Gma11g02223 631 Gene3D - 23 156 IPR036426 -
Gma11g02223 631 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 181 IPR036426 -
Gma11g02223 631 SMART blect_4 27 159 IPR001480 -
Gma11g02223 631 ProSiteProfiles PAN/Apple domain profile. 295 380 IPR003609 -
Gma11g02223 631 CDD B_lectin 36 159 IPR001480 -
Gma11g02223 631 ProSiteProfiles Protein kinase domain profile. 435 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02223 631 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 76 619 - -
Gma11g02223 631 Pfam PAN-like domain 323 359 IPR003609 -
Gma11g02223 631 SMART serkin_6 435 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02223 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 556 568 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02223 Gma-Chr11 37517224 37520534 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02223 390 619 Receptor kinase-like Gene Family AT4G23130 59.130 5.50e-87 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma11g02223 Pkinase 5.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02223 - - gmx:100782230 1224.92