Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02214 ATGGGTTGCTTCTTTAGTGTACCTTCAAAGATCAAAGCTGAGAGTCCTCCACGTAATGGTTTGAATTCAAAGGATGGTAGCAAAGAAGAGAATGATTTGAGCGGTTTAAGCAGCAAGGTGTCCTCTTCAGCTATGCTTCTAACACCTCAGAGTGAGGATGAGATATTGCAGGCCAGCAATTTGAAGAACTTCACATTCAATGAGCTAAGAACTGCTACAAGGAACTTTCGTCCGGATAGTATGGTGGGTGAAGGCGGGTTTGGTTCTGTGTTTAAGGGGTGGATTGATGAGCACACACTTGCCCCTACTAAACCAGGGACAGGAATGGTCATTGCTGTGAAGAGACTTAACCAAGAAAGCAACCAGGGACACATTGAATGGTTGACAGAAATCAACTACCTGGGGCAGCTCAGTCATCCTAATCTTGTGAAACTAATTGGTTACTCCTTAGAGGATGATCACCGGATTTTGGTGTATGAATTTGTGGCCAAGGGTAGTTTGGATAATCACTTGTTCAGGAGGGGTTCTTACTTTCAACCACTCTCTTGGAACATCCGTATGAAGGTTGCTCTAGATGCTGCTAAGGGTCTTGCATTTCTTCACAGTGATGAAGTAGATGTAATATATAGAGACTTCAAAACTTCTAATATCTTACTGGATTCTaattataatgcaaaactctcggattttgggttggcaaaaaatggaccagaaggtgataagagccatgtctctacaagggtaatgggcacctatggctatgcagctcctgagtatATAGCCACAGGTCACCTAACCAAAAAGAGTGACATATACAGTTTTGGAGTTGTTCTTCTGGAACTCATGTCAGCGAAACGTGCACTGGACAACAACAGGCCAAGCGGGGAGCACAGTTTAGTTGAATGGGCCAAACCACTCCTCACCAACAAACACAAGATCTCCCAAGTTATGGATGCTCGCATAGAAGGCCAATACTCAAAGCGCGAAGCAAAGAGAATAGCTCACCTTGCAATTCAATGCCTATCTACAGAACAAAAACTTAGACCAAACATATATGAGGTGGTGAGATCATTGGAAAATCTTCACGATTCCAAAGACACAAGCTCAAGCAGCAGCGGTACTCCTAATCCAAGTTTATCTCCTTCTCCTCTTCATACATAG 1161 0.3902 MGCFFSVPSKIKAESPPRNGLNSKDGSKEENDLSGLSSKVSSSAMLLTPQSEDEILQASNLKNFTFNELRTATRNFRPDSMVGEGGFGSVFKGWIDEHTLAPTKPGTGMVIAVKRLNQESNQGHIEWLTEINYLGQLSHPNLVKLIGYSLEDDHRILVYEFVAKGSLDNHLFRRGSYFQPLSWNIRMKVALDAAKGLAFLHSDEVDVIYRDFKTSNILLDSNYNAKLSDFGLAKNGPEGDKSHVSTRVMGTYGYAAPEYIATGHLTKKSDIYSFGVVLLELMSAKRALDNNRPSGEHSLVEWAKPLLTNKHKISQVMDARIEGQYSKREAKRIAHLAIQCLSTEQKLRPNIYEVVRSLENLHDSKDTSSSSSGTPNPSLSPSPLHT 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02214 386 MobiDBLite consensus disorder prediction 362 386 - -
Gma11g02214 386 ProSiteProfiles Protein kinase domain profile. 76 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02214 386 Gene3D Transferase(Phosphotransferase) domain 1 162 376 - -
Gma11g02214 386 Gene3D Phosphorylase Kinase; domain 1 50 161 - -
Gma11g02214 386 SUPERFAMILY Protein kinase-like (PK-like) 53 358 IPR011009 -
Gma11g02214 386 PANTHER OS01G0588500 PROTEIN-RELATED 26 372 - -
Gma11g02214 386 PANTHER KINASE 1B 26 372 - -
Gma11g02214 386 MobiDBLite consensus disorder prediction 1 36 - -
Gma11g02214 386 ProSitePatterns Protein kinases ATP-binding region signature. 82 114 IPR017441 GO:0005524
Gma11g02214 386 Pfam Protein tyrosine and serine/threonine kinase 80 358 IPR001245 GO:0004672|GO:0006468
Gma11g02214 386 MobiDBLite consensus disorder prediction 364 386 - -
Gma11g02214 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02214 Gma-Chr11 37400470 37404363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02214 62 383 Glycoside Hydrolase AT3G07070 46.605 3.83e-99 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma11g02214 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02214 - - gmx:106795104 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02214 11 37400470 37404363 Gma11g02214 11 37400470 37404363 ECH
Gma18g00360 18 3136080 3140308 Gma11g02214 11 37400470 37404363 GST
Gma11g02214 11 37400470 37404363 Gma14g00590 14 5747394 5750424 PCT
Gma11g02214 11 37400470 37404363 Gma02g02338 02 49462875 49468102 PCT
Gma14g00590 14 5747394 5750424 Gma11g02214 11 37400470 37404363 PCT
Gma02g02338 02 49462875 49468102 Gma11g02214 11 37400470 37404363 PCT