Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02206 ATGGAGAGTCCCCATTCACTCTCTCCCTCTTCCTCCTCCTCCTCCTCCTCTTACTCCTCCGACGGCGTCGCCGGCTTCGAGACGGAGGAACCGCGGACGCCGCTGGCTGTGCGCCGCGCGCTGCAGCTCCTCAACTCCGGCCAGCCCGACCTGCGCCTCCAAGCCGCTCGCGACATCCGGCGCCTCACGAAGACGTCACAACGTTGTCGGCGCCAGTTATCCGAGGCTGTCGGTCCACTCGTTTCCATGCTCCGAGTCGACTCGCCCGAGTCACACGAACCCGCTCTCCTCGCCTTGCTCAACCTCGCCGTCAAAGACGAAAAGAATAAAATCAATATTGTGGAGGCCGGTGCATTAGAACCGATAATTAGTTTCCTCAAGTCTCAAAATCTAAATCTGCAGGAGTCTGCAACTGCATCTTTGCTCACACTATCTGCCTCTTCAACCAACAAACCAATCATTAGTGCTTGTGGTGCCATTCCTCTTCTTGTGAAGATCCTTAGAGATGGAAGCCCCCAAGCTAAAGCTGAGGCAGTAATGGCTCTCTCTAATTTATCAACACACCCTAACAATCTCAGGATCATTCTTAAGACAAACCCAATCCCTTTCATAGTTGATCTTCTCAAAACCTGTAAAAAATCCTCGAAAACTGCTGAGAAATGCTGTGCTTTGATAGAATCTTTGGTGGATTATGATGAGGGCAGGACTGCCTTGACATCCGAGGAAGGCGGGGTTCTTGCAGTCGTGGAAGTTCTCGAAATTGGCACTCTCCAAAGCAGGGAGCATGCTGTTGGAGCACTGCTGACAATGTGCCAAAGCGACCGATGTAAATACCGGGAACCAATTCTTAGAGAAGGTGTCATTCCAGGACTTCTTGAGCTTACTGTCCAAGGAACACCAAAGTCTCAGTCCAAAGCACGCAGCCTTCTGCAGTTACTGAGAGAGTCTCCTTATCCGAGATCTGAAATTCAACCTGATACCCTTGAGAATATAGTATGCAGCATCATATCACAGATCGATGGCGATGATCAATCTGGTAAGGCAAAGAAGATGCTGGCTGAGATGGTTCAAGTCAGCATGGAACAGAGTCTGAGACATTTACAGCAAAGGGCTCTTGTATGCACCCCAAGTGATCTTCCTATAGCTGGCTGTGCTGCTTCTGAAGTTTCTTCAAAATGA 1179 0.5013 MESPHSLSPSSSSSSSSYSSDGVAGFETEEPRTPLAVRRALQLLNSGQPDLRLQAARDIRRLTKTSQRCRRQLSEAVGPLVSMLRVDSPESHEPALLALLNLAVKDEKNKINIVEAGALEPIISFLKSQNLNLQESATASLLTLSASSTNKPIISACGAIPLLVKILRDGSPQAKAEAVMALSNLSTHPNNLRIILKTNPIPFIVDLLKTCKKSSKTAEKCCALIESLVDYDEGRTALTSEEGGVLAVVEVLEIGTLQSREHAVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQSKARSLLQLLRESPYPRSEIQPDTLENIVCSIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTPSDLPIAGCAASEVSSK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02206 392 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 117 159 IPR000225 GO:0005515
Gma11g02206 392 SUPERFAMILY ARM repeat 39 335 IPR016024 -
Gma11g02206 392 MobiDBLite consensus disorder prediction 1 31 - -
Gma11g02206 392 Pfam Armadillo/beta-catenin-like repeat 150 186 IPR000225 GO:0005515
Gma11g02206 392 Pfam Armadillo/beta-catenin-like repeat 107 144 IPR000225 GO:0005515
Gma11g02206 392 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 15 374 - -
Gma11g02206 392 PANTHER U BOX DOMAIN-CONTAINING 15 374 - -
Gma11g02206 392 MobiDBLite consensus disorder prediction 1 23 - -
Gma11g02206 392 SMART arm_5 188 230 IPR000225 GO:0005515
Gma11g02206 392 SMART arm_5 232 272 IPR000225 GO:0005515
Gma11g02206 392 SMART arm_5 147 187 IPR000225 GO:0005515
Gma11g02206 392 SMART arm_5 65 104 IPR000225 GO:0005515
Gma11g02206 392 SMART arm_5 106 146 IPR000225 GO:0005515
Gma11g02206 392 Gene3D - 26 374 IPR011989 -
Gma11g02206 392 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 158 200 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02206 Gma-Chr11 37295987 37299811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02206 37 314 U-box Gene Family AT2G23140 33.929 4.05e-40 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02206 - - gmx:100809684 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00367 18 3195760 3199913 Gma11g02206 11 37295987 37299811 GST
Gma11g02206 11 37295987 37299811 Gma14g00598 14 5821922 5826250 PCT
Gma11g02206 11 37295987 37299811 Gma02g02329 02 49395139 49398856 PCT
Gma14g00598 14 5821922 5826250 Gma11g02206 11 37295987 37299811 PCT
Gma02g02329 02 49395139 49398856 Gma11g02206 11 37295987 37299811 PCT