Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02172 ATGAGGAACCACAAGTCCCACATCGCTACATACCTCTCTTGTTTCCTCTCCGTAATCCTCTATGCACACTCCCAAGATGACACCTCAGCAATGCTCGCCCTCAGGGACACCCTCAACCCGCCTGAATCTCTCGGGTGGTCTAACCCAGACCCGTGTAAGTGGAAACACGTCGTGTGCTCTGAAGAGGTAAAACGGGTCGCCCGGATCCAAATCGGGCACCAGGGCCTCCAGGGGACACTCCCCAACCCCACCGTGATCCAAACCTTGACCCAATTGGAACGCTTGGAGCTCCAATTCAACAACATTTTGGGTCATCTTCCAAGCCTAAACGGTTTAAGCTCCCTCCAAGTCCTCATTCTTAGCAATAACCAATTCTCTTCCATTCCAAACGACTTCTTCATCGGCTTGTCGGAGCTTCAAAGCGTCGAGATCGACAACAACCCGTTCAAACCTTGGAAAATCCCTGACAACTTCGTTAACTGTTCTTCCCTCCAAAAAATTTCCACGAATTCAACCAACATTGTCGGAACGCTCCCGGATTTCTTCTCGAGCCTTCCCACGTTGACCCACTTGCACTTGGCCTTCAATAATCTCGAGGGTGTGTTGCCTTTGAGCTTTTCCGGGTCGCAGATTGAGACCCTCTGGTTGAACGGACAAAAGGGTGGTGAAAGCAACAACCTTGGCAGTAATGTTGATGTTTTGCAGAACATGACATCGTTGACGCAGGTTTGGTTGCATTCCTATGCCTTTACTAGGCCTCTTCCTGAATTTTCTGGGTTGGAAAGCTTGCAAGATTTGAACTTGAGGGATAATGCTTTCACGAGTCCTGTTCCCGGGTCTTTGTTGGGGTTGAAATCACTCAATGTTATGAACTTGACTAATAACTTGTTTCAGGGGGCAGTGCCTGAGTTTGGTTCTGGGGTTGAGGTGGATTTGGATTTGGGTGACGATTCTAATAGTTTTTGTTTGTCGCATGTAAGGAATTGTGATCCAAGGGTGGAGATTCTGCTTTCTGTTGTGAGGGTCTTAGGGTATCCTAGAAGGTTTGCTAGGAATTGGAAGGGGAATAATCCTTGTGCGGATTGGATTGGGATGGGTCTTGAGGGTACTATAGCTCCTGAGTTTGGTTTGCTTAAATCACTGCAAAGGCTTGTGCTTGCTGATAATAATCTCATTGGGCCAATTCCAAAAGAGTTGGCTTTTTTGCCCGGGCTTGTTGAATTGAATGTTGCAAACAATCGTCTTTATGGGAAGATCACGAGTTTTAAGAGCCATGTGGTTCTTACCACAAATGGGAATAAGGACATAGGGAAGGATAAGCCCAGCCTAGGGCCAAGATCATCACCTTTAGGTCCACTGAATTCAACAGCTCCGAACAGAAGTGAAGAAAATGATGGGAAAAGATCCTTACATGTAGTGGTGATTGTGTTTGTTGTGATTGGTGGTGTGGTGTTGGTTTTGGTGATTGGTTTCTTGGTTTTTTGTCTGTTTAGGATGAAGCAGAAACGGTTGAGCAAGGTGCAGAGTCCAAATGCAATGGTTATTCATCCACGGCATTCTGGATTGGACAATGAAAATGTGAAGATAACGATTGCAGCTTCAAGTCTTAGTGTTGATGTTAGTGGAATTGGAATGCGAACCATGGCTGGCAGTGAGGCGGGGGATATTCAAATGGGTGAAGCAGGAAACATGATTATTTCTATACAAGTTCTGAGGAATGTCACTGACAATTTCAGTGAGAAGAATATACTGGGACAAAGAGGTTTTGGAACGGTTTACAAAGGTGAACTGCATGACGACCCAAAgattgttgtgaaaaggatggagtcgggggcaattagtgggaaaggtgcaacaaaatttaagtctgaaattgttgttttgaccaaggttcgccaccggcatcttgtttctcttcttggttactgcttggatgggaatgagaagcttcttgtgtatgagtacatgcctCAGGGGACATTAAGTAAACACCTTTTTAATTGGATGGAAGAAGGACTGAAGCCACTGGAATGGAACAGAAGATTGACCATTGCCTTAGATTTGGCAAGGGTTGTTGAGTACCTTCATAGCTTGGCCCATCAAAGCTTCATTCATAGAGATTTAAAGCCTTCAAACATTCTCCTTGGAGATGATGTGAGAGCAAAGGTTTCAGATTTTGGTCTTGTGCGTCTTGCTCCAGAAGGAAAAGCTACCATAGAAACAAGGATTGCTGGAACTTTTGGATATTTGGCACCAGAATACGCAGTTATTGGTCGTGTGACAACTAAAGTTgatgtgttcagctttggggtaatattgatggagctaataactggaagaagagcacttgatgatacccaaccagaggataacatGCACCTTAAAGCCATTGACCACACAATTGAGCTCAATGAGGAAACATTTGCTAGTATCCACACCGTGGCTGAGTTAGCTGGCCACTGTTGTGCAAGGGAGCCATATCAAAGGCCAGACGCAGGTCATGTTGTTAATGTGCTTTCTTCTCTTGTAGAACTTTGGAAACCATCTGATCAAAGTTCTGAAGATGTATATGGCATTGACCTAGCCATGTCTTTACCACAAGCATTGAAGAAATGGCAGGCTTATGAAGGTAGAAGCCAAATGGAATCTTCTTCTTCCATACTCCTACCTCCTAtgatatga 2682 0.4079 MRNHKSHIATYLSCFLSVILYAHSQDDTSAMLALRDTLNPPESLGWSNPDPCKWKHVVCSEEVKRVARIQIGHQGLQGTLPNPTVIQTLTQLERLELQFNNILGHLPSLNGLSSLQVLILSNNQFSSIPNDFFIGLSELQSVEIDNNPFKPWKIPDNFVNCSSLQKISTNSTNIVGTLPDFFSSLPTLTHLHLAFNNLEGVLPLSFSGSQIETLWLNGQKGGESNNLGSNVDVLQNMTSLTQVWLHSYAFTRPLPEFSGLESLQDLNLRDNAFTSPVPGSLLGLKSLNVMNLTNNLFQGAVPEFGSGVEVDLDLGDDSNSFCLSHVRNCDPRVEILLSVVRVLGYPRRFARNWKGNNPCADWIGMGLEGTIAPEFGLLKSLQRLVLADNNLIGPIPKELAFLPGLVELNVANNRLYGKITSFKSHVVLTTNGNKDIGKDKPSLGPRSSPLGPLNSTAPNRSEENDGKRSLHVVVIVFVVIGGVVLVLVIGFLVFCLFRMKQKRLSKVQSPNAMVIHPRHSGLDNENVKITIAASSLSVDVSGIGMRTMAGSEAGDIQMGEAGNMIISIQVLRNVTDNFSEKNILGQRGFGTVYKGELHDDPKIVVKRMESGAISGKGATKFKSEIVVLTKVRHRHLVSLLGYCLDGNEKLLVYEYMPQGTLSKHLFNWMEEGLKPLEWNRRLTIALDLARVVEYLHSLAHQSFIHRDLKPSNILLGDDVRAKVSDFGLVRLAPEGKATIETRIAGTFGYLAPEYAVIGRVTTKVDVFSFGVILMELITGRRALDDTQPEDNMHLKAIDHTIELNEETFASIHTVAELAGHCCAREPYQRPDAGHVVNVLSSLVELWKPSDQSSEDVYGIDLAMSLPQALKKWQAYEGRSQMESSSSILLPPMI 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02172 893 ProSiteProfiles Protein kinase domain profile. 578 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02172 893 MobiDBLite consensus disorder prediction 433 464 - -
Gma11g02172 893 SUPERFAMILY Protein kinase-like (PK-like) 558 847 IPR011009 -
Gma11g02172 893 SMART LRR_typ_2 185 208 IPR003591 -
Gma11g02172 893 SMART LRR_typ_2 112 135 IPR003591 -
Gma11g02172 893 SMART LRR_typ_2 284 307 IPR003591 -
Gma11g02172 893 SMART LRR_typ_2 378 403 IPR003591 -
Gma11g02172 893 SMART LRR_typ_2 260 283 IPR003591 -
Gma11g02172 893 SMART LRR_typ_2 89 111 IPR003591 -
Gma11g02172 893 PANTHER OSJNBA0070M12.3 PROTEIN 10 891 - -
Gma11g02172 893 SUPERFAMILY L domain-like 31 425 - -
Gma11g02172 893 Gene3D Transferase(Phosphotransferase) domain 1 656 860 - -
Gma11g02172 893 ProSiteProfiles Leucine-rich repeat profile. 114 135 IPR001611 GO:0005515
Gma11g02172 893 Pfam Protein tyrosine and serine/threonine kinase 581 838 IPR001245 GO:0004672|GO:0006468
Gma11g02172 893 Gene3D Phosphorylase Kinase; domain 1 541 655 - -
Gma11g02172 893 Gene3D Ribonuclease Inhibitor 331 440 IPR032675 -
Gma11g02172 893 PANTHER RECEPTOR PROTEIN KINASE TMK1 10 891 - -
Gma11g02172 893 Gene3D Ribonuclease Inhibitor 24 329 IPR032675 -
Gma11g02172 893 SMART serkin_6 578 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02172 893 Pfam Leucine rich repeat N-terminal domain 25 60 IPR013210 -
Gma11g02172 893 Pfam Leucine rich repeat N-terminal domain 334 364 IPR013210 -
Gma11g02172 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Gma11g02172 893 Pfam Leucine rich repeat 91 148 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02172 Gma-Chr11 36822792 36826145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02172 83 845 Receptor kinase-like Gene Family AT5G07280 31.618 4.30e-73 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Gma11g02172 PK_Tyr_Ser-Thr 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02172 K00924 - gmx:100813768 1547.33