Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02158 ATGGTTCTCTCCAAAACCACCTCCGAATCCGACGTCTCTGTCCACTCAACCTTCGCTTCTCGATATGTCAGAACTTCGCTTCCCAGGTTTAAGATGCCGGAGGAGTCGATACCAAAGGAGGCAGCGTATCAAATAATAAACGATGAGTTGATGTTGGATGGGAACCCAAGGTTGAACTTGGCATCATTTGTGACAACCTGGATGGAGCCAGAGTGTGATAAACTCATCATGGCTGCCATTAATAAGAACTATGTTGACATGGACGAGTATCCTGTCACCACTGAGTTACAGAATCGATGTGTTAACATGATAGCTCATCTTTTCAATGCACCACTAGAAGAGACTGAGGCTGCAGTTGGTGTTGGCACGGTTGGCTCATCAGAGGCCATAATGTTAGCTGGATTGGCATTCAAAAGAAAGTGGCAAAACAGAAGGAAACAAGAGGGAAAACCTTTTGACAAACCCAACATTGTCACTGGAGCCAACGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGTTGAAGGAGGTGAAGCTCCGTGATGATTACTATGTGATGGACCCTGAAAAGGCCGTGGAATTGGTGGATGAGAACACTATTTGTGTTGCTGCTATCCTTGGTTCAACACTAAATGGAGAATTTGAAGATGTCAAACGCTTAAATGATCTCCTAATTGAAAAGAATAAAATAACTGGGTGGGACACTCCTATTCATGTTGATGCAGCAAGTGGTGGCTTCATTGCCCCATTTCTTTACCCAGAGCTTGAGTGGGACTTCCGGTTACCACTAGTGAAGAGCATCAATGTTAGTGGCCACAAGTATGGTTTGGTCTATGCTGGAATCGGTTGGGTTATCTGGAGAAGCAAGGAGGACTTGCCTGAGGAACTCATCTTTCACATCAACTATCTTGGTGCTGATCAACCCACCTTCACCCTTAACTTCTCCAAAGGTTCTAGCCAAGTCATTGCTCAATACTACCAACTAATTCGCCTTGGTTTTGAGGGATATAGAAACGTGATGGAAAACTGCAGAGACAACATGTTGGTGCTGAAAGAAGGACTAGAGAAAACAGGGAGATTTTCAATTGTGTCCAAAGACAATGGAGTGCCTTTGGTGGCATTCACACTGAAAGACCACACCCACTTTGATGAATTCCAAATCTCTGACTTCTTAAGGCGCTTTGGGTGGATAGTGCCAGCATACACCATGCCCCCAGATGCTCAACATGTCACAGTGCTTCGTGTTGTCATCAGGGAGGACTTCTCGAGGACTCTCGCAGAGCGCCTCGTGGCCGATGTTGAGAAGGTTCTGCATGAGCTTGATTCACTTCCTGCTAGGGTCATAAGCAGCACTAGTGTGACAGTCACTGCTGAAGAAAATGGCAAGGTAGTGGTTGCTAAGAAGAGTGCTATGGAGACTCAGAGGGAAATCACTGCCATTTGGAAGAAGTTTGTGTTGGAGAGGAAGAAGAACAATGACAAGATGAATGGTGTTTGTTAG 1512 0.4537 MVLSKTTSESDVSVHSTFASRYVRTSLPRFKMPEESIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEETEAAVGVGTVGSSEAIMLAGLAFKRKWQNRRKQEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLRDDYYVMDPEKAVELVDENTICVAAILGSTLNGEFEDVKRLNDLLIEKNKITGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCRDNMLVLKEGLEKTGRFSIVSKDNGVPLVAFTLKDHTHFDEFQISDFLRRFGWIVPAYTMPPDAQHVTVLRVVIREDFSRTLAERLVADVEKVLHELDSLPARVISSTSVTVTAEENGKVVVAKKSAMETQREITAIWKKFVLERKKNNDKMNGVC 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02158 503 Gene3D - 1 65 - -
Gma11g02158 503 SUPERFAMILY PLP-dependent transferases 15 444 IPR015424 -
Gma11g02158 503 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Gma11g02158 503 PANTHER GLUTAMATE DECARBOXYLASE 1 503 - -
Gma11g02158 503 CDD DOPA_deC_like 59 439 - -
Gma11g02158 503 Gene3D - 66 360 IPR015421 GO:0003824
Gma11g02158 503 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Gma11g02158 503 Gene3D - 361 448 - -
Gma11g02158 503 PANTHER GLUTAMATE DECARBOXYLASE 1 503 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02158 Gma-Chr11 36621468 36630614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02158 1 503 Calmodulin-binding Proteins AT5G17330 83.992 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02158 K01580 - gmx:100796533 1011.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00411 18 3748756 3759371 Gma11g02158 11 36621468 36630614 GST
Gma11g02158 11 36621468 36630614 Gma02g02282 02 48894805 48901601 PCT
Gma02g02282 02 48894805 48901601 Gma11g02158 11 36621468 36630614 PCT