Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02146 ATGGGTTCTTGTGCTACATCATCTGTTCTGACTAATCAATTTATTCCGTGGTCTACAACCAATACTGAATCTCCCTTGGACTCCAAATTGGGCGTCATATTTTATAAAATGTACAGAAATACAAACAAAAGACAACTCAGTCTCTCTTTTGCTTGGGATAGTTATAAAATCAGGAGTATTGGTGCGATTAAATCATACAAAGATGTATCTTATTTTCAAACCGAACAAGTAGGATCATGGGAAGATCCAGATACTGGAAGTGACAGTGAGTGTGATGATGAAGAATATGAGGAAGTTGAAGACGAGAACTTTGGATTTGAAAGTGATTCAGAAGAGGAAGGGATGAAGGCTTCAGTTGCTACTGATGTTAATATAACTTCAGGGGACAACTATGAAGAACTTATTAAGAAAGAGATTGAACAGCTTCTGGAACCGGAAGAAAGAGCAATATTGCAACAGAATATTACTCCTAACTTGGAAAAAATATCAACTGAAAAATGGAGCCCGCTGCACACTCTTGTGCTTTCAATGCAGATGAGTTGTGTGGATAAGCTTCTTGAAAATGGTGTTGATATTGATTTACCTGATAAGGAAGGTCTTACTGCACTTCATAAGGCAATTACGGGTAAAAAAGAAGCTGTGATTAGTCATCTTTTACGAAGAGGTGCAAGTCCTCATGTTAAGGATAAGGATGGAGCCGCTCCACTTCATTATGCAGTTCAAGTTGGTGCCAAGATGACTGTGAAATTATTGATCAAGTACAAGGCTGATGTCAATGTTGAAGATAATGAAGGTTGGACCCCCTTGCACATTGCCATTCAAAGCAGAAATAGAGATATAGCAAAAATTTTGTTAGTCAATGGTGCTGATAAGACTAGGAAAAATAAGGACGGAAAAACAGCCCTGGATCTAAGCTTATGTTATGGGAAAGATTTCAAGTCTTATGACCTTGCCAAATTACTGAAGACGGTTCCAGCTGACAGTTATCTATGA 993 0.3807 MGSCATSSVLTNQFIPWSTTNTESPLDSKLGVIFYKMYRNTNKRQLSLSFAWDSYKIRSIGAIKSYKDVSYFQTEQVGSWEDPDTGSDSECDDEEYEEVEDENFGFESDSEEEGMKASVATDVNITSGDNYEELIKKEIEQLLEPEERAILQQNITPNLEKISTEKWSPLHTLVLSMQMSCVDKLLENGVDIDLPDKEGLTALHKAITGKKEAVISHLLRRGASPHVKDKDGAAPLHYAVQVGAKMTVKLLIKYKADVNVEDNEGWTPLHIAIQSRNRDIAKILLVNGADKTRKNKDGKTALDLSLCYGKDFKSYDLAKLLKTVPADSYL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02146 330 Pfam Ankyrin repeats (3 copies) 215 295 IPR002110 GO:0005515
Gma11g02146 330 Gene3D - 131 235 IPR036770 -
Gma11g02146 330 ProSiteProfiles Ankyrin repeat profile. 264 296 IPR002110 GO:0005515
Gma11g02146 330 SMART ANK_2a 297 330 IPR002110 GO:0005515
Gma11g02146 330 SMART ANK_2a 165 194 IPR002110 GO:0005515
Gma11g02146 330 SMART ANK_2a 231 260 IPR002110 GO:0005515
Gma11g02146 330 SMART ANK_2a 198 227 IPR002110 GO:0005515
Gma11g02146 330 SMART ANK_2a 264 293 IPR002110 GO:0005515
Gma11g02146 330 ProSiteProfiles Ankyrin repeat region circular profile. 264 290 - -
Gma11g02146 330 Pfam Ankyrin repeats (many copies) 167 214 IPR002110 GO:0005515
Gma11g02146 330 ProSiteProfiles Ankyrin repeat profile. 198 230 IPR002110 GO:0005515
Gma11g02146 330 Gene3D - 236 323 IPR036770 -
Gma11g02146 330 ProSiteProfiles Ankyrin repeat region circular profile. 198 230 - -
Gma11g02146 330 PANTHER ANKYRIN REPEAT AND SOCS BOX PROTEIN 3 97 323 - -
Gma11g02146 330 SUPERFAMILY Ankyrin repeat 157 321 IPR036770 -
Gma11g02146 330 ProSiteProfiles Ankyrin repeat region circular profile. 231 263 - -
Gma11g02146 330 ProSiteProfiles Ankyrin repeat profile. 165 197 IPR002110 GO:0005515
Gma11g02146 330 ProSiteProfiles Ankyrin repeat profile. 231 263 IPR002110 GO:0005515
Gma11g02146 330 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 97 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02146 Gma-Chr11 36493182 36497948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02146 150 290 Ion Channels AT2G25600 31.206 2.08e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02146 - - gsj:114380843 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00419 18 3854828 3857281 Gma11g02146 11 36493182 36497948 GST