Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02123 ATGATACTGCAGCCAATTATTAAGCTCCTGGCCTTAACTTTGATATGGTGGAGCAGTGTTAATGTTGAATATGCAGTTGCAGCGACCCGCGACACACGTGTAATAAACTCTGGGTGTAGCCCAATCAACGCTACCAACACGGGTAGCTTCTTTGCGAATGTCAATGAGACATTCTCAGAGCTGAGAGGAGAAATAAGGAACCAGAGCAGGCACTTTGGCACATCATTGAAATCCAAAGGAGATGTCAATACATATACTATGTTTCAATGCAGAAATTATCTCTCCAGAAATGACTGTCTTGCTTGCATCAACACTGCTTCCACCCAAATCCGGGATATATGCAAAATAGCGAACGGTGCCAGAGTCATCTACAATGACTGCTTCCTCAGGTATGAGAGTGAGAGGTTCTACCAACAGACCAACGAAATCGGTGGTGGGGTAACATGTGGGAACAAGAGCACAAATGCCACAGGTTTTAGAGCAGTTGGACAACAAGCACTACTGGACCTTCAAAAAGCAACACCTAAAATTAAAGGTTTCTATGCAGCTACTAAGACACAGGTGGCTGGTGGTAGTGCAAATATTTATGCCATTGCACAGTGTGTTGAAACTGCCTCCCAACAGAAATGTCTGGATTGCATGCAAGTTGGATACAACAACTTACAAAGTTGCCTTCCCAGCACAGATGGTTCAGCATATGATGCTGGCTGTTTCATGAGATTCTCCACCACACCTTTCTTTGCTGATAATCAGACCATTAATATCAGACCCTATTTAAAAGAAGGAGGTTCAAGCAAGAAGTGGGCCATTATAGGTGGTGTCGTAGGAGGTGTTGTTCTCCTCCTTGTGTTGTTTGCCTGTAGATTGTTTACAAAACAAAAGAGGGTTCCCAAAGCTGACATATTGGGAGCAACTGAGTTGAGAGGTCCGGTTAACTACAAGTATACAGATTTGAAAGCTGCAACAAAAAATTTCAGTGTTGAAAATAAACTTGGAGAAGGAGGATTTGGTGCTGTATACAAGGGTACTCTGAAAAATGGAAAAGTTGTGGCCGTCAAGAAACTAGTGTTGGGAAAATCAAGCAAGATGGAGGATGATTTTGAAGGTGAAGTGAAGCTTATAAGTAATGTTCATCATAGGAATCTCGTTAGACTTCTTGGTTGTTGCAGCAAAGGCCAAGAGAGAATCCTAGTTTATGAATACATGGCAAATAGCAGCCTTGACAAATTCTTATTTGGTGACAAAAAGGGTTCCCTCAATTGGAAACAACGCTATGATATAATTTTGGGAACCGCAAGGGGTCTAGCGTATCTACATGAAGAGTTTCATGTATCCATCATTCATAGAGATATAAAGACCGGTAATATCCTTCTAGATGATGATCTCCAGCCCAAAATTGCTGATTTTGGGTTGGCAAGGCTTTTGCCAAGGGATCGTTCTCACCTTAGCACAAAATTTGCTGGAACATTGGGATACACAGCACCTGAGTATGCAATGCAAGGCCAATTGTCAGAGAAGGCTGATACCTACAGTTATGGTATTGTGGTCCTAGAAATCATAAGTGGTCAAAAGAGTACCAATGTTAAGATTGATGATGAGGGTCGTGAGTACCTTCTTCAACGAGCATGGAAACTGTACGAGAGAGGCATGCAATTGGAGCTTGTGGACAAGGACATAGACCCTAATGAATATGATGCTGAAGAAGTGAAGAAAATCATAGAAATTGCTTTATTGTGCACTCAAGCATCTGCTGCAACAAGGCCAACAATGTCAGAATTAGTAGTGCTACTCAAAAGCAAGAGCTTAGTGGAGCAACTGCGACCAACTATGCCTGTGTTTGTCGAAGCGAAAATGATGAATGGGGAAGGTATCTCTGATAATCCATCTAATGCCACTCTCTCCATTTCTGTTCTATCGGCCCGATGA 1926 0.4226 MILQPIIKLLALTLIWWSSVNVEYAVAATRDTRVINSGCSPINATNTGSFFANVNETFSELRGEIRNQSRHFGTSLKSKGDVNTYTMFQCRNYLSRNDCLACINTASTQIRDICKIANGARVIYNDCFLRYESERFYQQTNEIGGGVTCGNKSTNATGFRAVGQQALLDLQKATPKIKGFYAATKTQVAGGSANIYAIAQCVETASQQKCLDCMQVGYNNLQSCLPSTDGSAYDAGCFMRFSTTPFFADNQTINIRPYLKEGGSSKKWAIIGGVVGGVVLLLVLFACRLFTKQKRVPKADILGATELRGPVNYKYTDLKAATKNFSVENKLGEGGFGAVYKGTLKNGKVVAVKKLVLGKSSKMEDDFEGEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDKFLFGDKKGSLNWKQRYDIILGTARGLAYLHEEFHVSIIHRDIKTGNILLDDDLQPKIADFGLARLLPRDRSHLSTKFAGTLGYTAPEYAMQGQLSEKADTYSYGIVVLEIISGQKSTNVKIDDEGREYLLQRAWKLYERGMQLELVDKDIDPNEYDAEEVKKIIEIALLCTQASAATRPTMSELVVLLKSKSLVEQLRPTMPVFVEAKMMNGEGISDNPSNATLSISVLSAR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02123 641 ProSitePatterns Protein kinases ATP-binding region signature. 331 354 IPR017441 GO:0005524
Gma11g02123 641 ProSiteProfiles Gnk2-homologous domain profile. 141 246 IPR002902 -
Gma11g02123 641 Pfam Salt stress response/antifungal 149 243 IPR002902 -
Gma11g02123 641 Pfam Salt stress response/antifungal 43 133 IPR002902 -
Gma11g02123 641 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 634 - -
Gma11g02123 641 ProSiteProfiles Gnk2-homologous domain profile. 32 136 IPR002902 -
Gma11g02123 641 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 14 634 - -
Gma11g02123 641 SMART serkin_6 325 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02123 641 ProSiteProfiles Protein kinase domain profile. 325 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02123 641 Gene3D Phosphorylase Kinase; domain 1 293 401 - -
Gma11g02123 641 CDD STKc_IRAK 331 598 - -
Gma11g02123 641 Gene3D Single helix bin 259 292 - -
Gma11g02123 641 Gene3D Transferase(Phosphotransferase) domain 1 402 609 - -
Gma11g02123 641 Gene3D - 147 246 IPR038408 -
Gma11g02123 641 Gene3D - 31 136 IPR038408 -
Gma11g02123 641 Pfam Protein tyrosine and serine/threonine kinase 327 595 IPR001245 GO:0004672|GO:0006468
Gma11g02123 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Gma11g02123 641 SUPERFAMILY Protein kinase-like (PK-like) 309 597 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02123 Gma-Chr11 35856374 35861508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02123 33 639 Receptor kinase-like Gene Family AT1G70520 36.731 2.37e-127 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma11g02123 PK_Tyr_Ser-Thr 3.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02123 - - gmx:100793189 1249.96