Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02118 ATGATACTGCAGCAGATTATTAAGCTCCTGACCTTAACTTTGATATGGTGGAGCAGTATTAATGTTGAATGTGCAGTTGCGGGGACACGCGACACACGTGTGATAAACTCTGGATGCAGCACAATCAACGCTTCCAACCCGGGTAGTTTCTTTGGGAATGTCAATGAGACAATCTCAGAGCTGAGAGGAGAAATTAGGAACCAAAGCTTGCACTTTGGCACATCATTGAAATCCAAAGGAGATGTCAATACATATACTATGTTTCAATGCAGAAACTATCTCTCCAGAAATGACTGTCTTGCTTGCATCAACACTGCCTCCACCCAAATCCGGGATATATGCAAAAAAGCCAACGGCGCAAGACTCATCTACAATGACTGCTTCCTCAGGTATGAGAGTGAGAGGTTCTACCAACAGACCAACGAAATCGGTGGTGGGGTAACATGTGGGAACAAGAGCACAAATGCCACAGGTTTTAGAGAAGTTGGACAACAAGCACTACTGGACCTACAAAAAGCAACACCTAAAATTAAAGGTTTCTATGCAGCTACTAAGACACAGGTGGCTGGTGGTAGTGCAAATATTTATGCCATTGCACAGTGTGTTGAAACTGCTTCCCCACAGAAATGCCTGGATTGCATGCAAGTTGGATACAACAACTTACAAAGTTGCCTTCCCAGCACAGATGGTTCAGCATATGATGCTGGCTGTTTCATGAGATTCTCCACCACACCGTTCTTTGCTGATAATCAAACCATTAATATCAGACCCTATTTAAAAGAAGGAGGTTCAAGCAAGAAGTGGGCCATTATAGGTGGCGTCGTAGGAGGTGTTGTTCTCCTCCTTGTGTTGTTTGCCTGGAGATTGTTTACAAAACCAAAGAGAGCTCCCAAAGCTGACATATTGGGAGCAACTGAGTTGAAAGGTCCAGTTAGCTTCAAGTATAAAGATTTGAAAGCTGCAACAAAAAATTTCAGTGCTGATAATAAACTTGGAGAAGGAGGTTTTGGTGCTGTATACAAGGGTACTCTGAAAAATGGAAAAGTTGTTGCTGTGAAGAAACTAATGTTGGGGAAATCAAGCAAGATGGAGGATGATTTTGAAAGTGAAGTGAAGCTTATAAGTAATGTTCATCATCGGAATCTCGTTAGACTTCTTGGTTGTTGCAGCAGAGGCCCCGAGAGAATCCTAGTTTATGAATATATGGCAAATAGCAGCCTTGACAAATTCTTATTTGGTTCCAAAAAAGGTTCCCTCAATTGGAAACAACGTTATGATATAATTTTGGGCACAGCAAGGGGACTAGCATATCTACATGAGGAGTTCCATGTGTCCATCATTCATAGAGATATAAAGACCGGTAATATCCTTCTAGATGATTATCTCCAGCCCAAAATTGCAGATTTTGGGTTGGCAAGGCTTTTGCCAAGGGATCGTTCACATCTCAGCACAAAATTTGCTGGAACACTGGGATACACAGCACCTGAATATGCAATGCAAGGTCAATTATCAGAGAAAGCCGATACCTACAGTTATGGTATTGTGGTCCTAGAAATCTTAAGTGGTCAAAAGAGTACCAATGTAAAGGTTGATGACGAGGGTCGCGAGTACCTTCTTCAACGAGCATGGAAACTGTATGAGAGAGGCATGCAGTTGGAGCTTGTGGACAAGGACATAGACCCCAATGAATATGATGCAGAAGAAGCGAAGAAAATCATTGAAATTGCTTTATTATGCACTCAAGCATCAGCTGCAGCCAGGCCAACAATGTCTGAATTAATAGTTCTACTCAAAAGCAAGAGCTTAGTGGAGCACCTTCGACCAACTATGCCGGTGTTTGTTGAAACGAATATGATGAATCAGGAAGGTGGCAGCTCTCCTGGTACATCTAATGCTACTATCTCCATTTCCGTTCTATCGGCCAGATGA 1929 0.4241 MILQQIIKLLTLTLIWWSSINVECAVAGTRDTRVINSGCSTINASNPGSFFGNVNETISELRGEIRNQSLHFGTSLKSKGDVNTYTMFQCRNYLSRNDCLACINTASTQIRDICKKANGARLIYNDCFLRYESERFYQQTNEIGGGVTCGNKSTNATGFREVGQQALLDLQKATPKIKGFYAATKTQVAGGSANIYAIAQCVETASPQKCLDCMQVGYNNLQSCLPSTDGSAYDAGCFMRFSTTPFFADNQTINIRPYLKEGGSSKKWAIIGGVVGGVVLLLVLFAWRLFTKPKRAPKADILGATELKGPVSFKYKDLKAATKNFSADNKLGEGGFGAVYKGTLKNGKVVAVKKLMLGKSSKMEDDFESEVKLISNVHHRNLVRLLGCCSRGPERILVYEYMANSSLDKFLFGSKKGSLNWKQRYDIILGTARGLAYLHEEFHVSIIHRDIKTGNILLDDYLQPKIADFGLARLLPRDRSHLSTKFAGTLGYTAPEYAMQGQLSEKADTYSYGIVVLEILSGQKSTNVKVDDEGREYLLQRAWKLYERGMQLELVDKDIDPNEYDAEEAKKIIEIALLCTQASAAARPTMSELIVLLKSKSLVEHLRPTMPVFVETNMMNQEGGSSPGTSNATISISVLSAR 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02118 642 ProSitePatterns Protein kinases ATP-binding region signature. 331 354 IPR017441 GO:0005524
Gma11g02118 642 Pfam Protein tyrosine and serine/threonine kinase 327 595 IPR001245 GO:0004672|GO:0006468
Gma11g02118 642 Gene3D Phosphorylase Kinase; domain 1 299 401 - -
Gma11g02118 642 ProSiteProfiles Protein kinase domain profile. 325 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02118 642 Gene3D Transferase(Phosphotransferase) domain 1 402 608 - -
Gma11g02118 642 ProSiteProfiles Gnk2-homologous domain profile. 32 136 IPR002902 -
Gma11g02118 642 Gene3D Single helix bin 259 291 - -
Gma11g02118 642 Gene3D - 147 246 IPR038408 -
Gma11g02118 642 Gene3D - 31 136 IPR038408 -
Gma11g02118 642 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 14 638 - -
Gma11g02118 642 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 638 - -
Gma11g02118 642 CDD STKc_IRAK 331 598 - -
Gma11g02118 642 SUPERFAMILY Protein kinase-like (PK-like) 308 597 IPR011009 -
Gma11g02118 642 ProSiteProfiles Gnk2-homologous domain profile. 141 246 IPR002902 -
Gma11g02118 642 SMART serkin_6 325 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02118 642 Pfam Salt stress response/antifungal 42 133 IPR002902 -
Gma11g02118 642 Pfam Salt stress response/antifungal 149 243 IPR002902 -
Gma11g02118 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02118 Gma-Chr11 35741967 35745746 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02118 26 642 Receptor kinase-like Gene Family AT1G70520 36.407 1.45e-127 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma11g02118 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02118 - - gmx:100305452 1251.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00434 18 4052748 4057712 Gma11g02118 11 35741967 35745746 GST