Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02116 ATGCAACCCAAGTTCGTCGCCTTAACCTTTTTGGTGTTGTGGTCACGGTGGAGCTTTGAGGGTGCAGTAGGAGACCCTCAACTCTTTTTACTAGTATCAGAGTGTAGTGGATTCGGGGTACCCAACTTGTCCAACTTCTACCAAAATCTAAACGCAAGTTTTGCAGACCTGAGAGCACAGGTGAGCAACAATAGCAAGCACTTTGCCACGGCTCAATCAGTCACCGGAACAAGCCCTGTCTATGCTATGTTTCAATGCGTCAACTACCTCTCCATCACTGACTGCGCCACCTGCTTAGCCGCCGCCGCCACCGAAATCCGCAACTGCTCCACCGGAATCAACAGCGGTGCCCGTGTCGTTTATGACGGATGCTTCCTCAGGTATGAGAGCATTGACTTCTTTCAAGAGACCACTCTGGCAGGCAACAGTATGAGTTGTGGAAATCAGACAGCAGTTGAAGCCAATACTTTTAGTTCAATTGCACAGCAAGTGCTAACGAACCTGCAAATTGCAACACCCAAAATTACTGGTTACTTTGCAGCTACCATGTTACAAGTGGCTGACAGTGCAATATATGCCATTGCACAATGTGCTGAAACTTTCACACAAGACATTTGTTCGAGTTGTTTGTCAATTGAACAAAGCGACATACAAGGTTGTCTTCCCAATACAAATGGTAGGGCATTCGATCCTCCTGGGTGCTTTCTGAGATACTCGGGGACACCCTTCTTTGCTGATAATCAAACCACTGATATCAGTCGCTTCTTAATACAAGGAGAAAGTTCAAGCAAGAAGTGGGTCATTTTTGGTGGAGGTGTTGGAGGTGTAGTCCTTGTTGCGATCCTTCTTTCATTATTAACCTGGCATAGAAGATCCCAAAGTCCCAAGAGTGTTCCTAGAGCTTACAAATTTGGAGCAACTGAGTTGAAAGCAGCAACAAAGTACAATTATAGTGACTTGAAAGCTGCAACAAAAAATTTTAGTCAGAAAAATAAGCTAGGAGAAGGAGGGTTTGGCGCTGTATACAAGGGGACAATGAAAAATGGGAAAGTGGTTGCAGTCAAAAAGTTACTTTCAGGAAAATCCAGCAAGATCGATGACGAATTTGAGAGTGAAGTAGCACTTATAAGTAATGTTCATCACAAAAATCTGGTTCGACTTCTTGGTTGTTGTAGTAAAGGCCAAGACAGAATTCTTGTTTACGAATACATGGCAAACAACAGCCTTGACAAATTCCTATTTGGTAAAAGAAAAGGTTCACTCAACTGGAGACAACGCTATGATATAATTTTGGGCACAGCAAGGGGATTGGCCTATCTACACGAGGAATTTCATGTTTCAATCATACATAGAGATATTAAGAGTGGCAATATCCTCTTGGATGAAGAACTTCAACCCAAAATTGCTGATTTTGGATTGGCGAAGTTGCTTCCAGGGGACCAATCTCATCTTAGCACAAGATTTGCTGGAACATTGGGATACACGGCACCTGAGAGTACTGAAGTTAAAGTTGTTGATGATGATGATTGTGAGGATGAATACCTTCTTCAACAAACATGGAAGTTGTATGAGAGAGGCATGCACTTGGAGATAGTGGACAAAAGCTTAGACCCTAATAGCTATGATGCAGAAGAAGTGAAGAAAGTCATAGGCATTGCTTTGTTGTGTACTCAAGCATCTGCTGCAATGAGGCCAGCCATGTCTGAAGTAGTAGTCCTACTCAGTAGCAATGACTTACTTGAACATATGAGACCTTCGATGCCTATCTTTTTTGAGTCAAATTTAAGGCCCCGCAAAGATATATCTGCTTTCAACTGA 1818 0.4296 MQPKFVALTFLVLWSRWSFEGAVGDPQLFLLVSECSGFGVPNLSNFYQNLNASFADLRAQVSNNSKHFATAQSVTGTSPVYAMFQCVNYLSITDCATCLAAAATEIRNCSTGINSGARVVYDGCFLRYESIDFFQETTLAGNSMSCGNQTAVEANTFSSIAQQVLTNLQIATPKITGYFAATMLQVADSAIYAIAQCAETFTQDICSSCLSIEQSDIQGCLPNTNGRAFDPPGCFLRYSGTPFFADNQTTDISRFLIQGESSSKKWVIFGGGVGGVVLVAILLSLLTWHRRSQSPKSVPRAYKFGATELKAATKYNYSDLKAATKNFSQKNKLGEGGFGAVYKGTMKNGKVVAVKKLLSGKSSKIDDEFESEVALISNVHHKNLVRLLGCCSKGQDRILVYEYMANNSLDKFLFGKRKGSLNWRQRYDIILGTARGLAYLHEEFHVSIIHRDIKSGNILLDEELQPKIADFGLAKLLPGDQSHLSTRFAGTLGYTAPESTEVKVVDDDDCEDEYLLQQTWKLYERGMHLEIVDKSLDPNSYDAEEVKKVIGIALLCTQASAAMRPAMSEVVVLLSSNDLLEHMRPSMPIFFESNLRPRKDISAFN 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02116 605 Gene3D Phosphorylase Kinase; domain 1 291 403 - -
Gma11g02116 605 Gene3D - 140 243 IPR038408 -
Gma11g02116 605 Gene3D - 29 133 IPR038408 -
Gma11g02116 605 ProSiteProfiles Protein kinase domain profile. 327 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02116 605 ProSiteProfiles Gnk2-homologous domain profile. 139 243 IPR002902 -
Gma11g02116 605 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 513 587 - -
Gma11g02116 605 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 17 498 - -
Gma11g02116 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Gma11g02116 605 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Gma11g02116 605 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 513 587 - -
Gma11g02116 605 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 17 498 - -
Gma11g02116 605 SUPERFAMILY Protein kinase-like (PK-like) 313 587 IPR011009 -
Gma11g02116 605 Pfam Salt stress response/antifungal 43 129 IPR002902 -
Gma11g02116 605 Pfam Salt stress response/antifungal 146 239 IPR002902 -
Gma11g02116 605 Pfam Protein kinase domain 327 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02116 605 SMART serkin_6 327 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02116 605 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Gma11g02116 605 Gene3D Transferase(Phosphotransferase) domain 1 504 589 - -
Gma11g02116 605 Gene3D Transferase(Phosphotransferase) domain 1 404 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02116 Gma-Chr11 35716955 35721700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02116 3 602 Receptor kinase-like Gene Family AT1G70520 34.796 1.29e-106 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma11g02116 Pkinase 1.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02116 - - gmx:100779353 966.452