Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02110 ATGAAAAGCGGGAAAGTTGTTGTAGTAAAAAAGTTACTTTCGGGAAAATCCAGCAAGATCAATGACGTATTTGAGAGTGAAGTAACACTTCTTGGTTGTTGTAGTAAAGGCCAAGACAGAATTCTTGTTTATGAATACATGGCAAATAACAGCCTTGAGAAATTCTTATTTGTTCTTGAAATCATAAGCGGTCGAAAGAGTACTGATGTGAATGTTATTGATGATGATGGTGAGCATAATTACTTTCTTCGACAAGTTACTGACATTTCACTGGCTGATTACGTTGAAGTTGCGGCATCCAAGCACGCCACATATGTTCCTCACACCACCGAAAAGTACTTGGTGAAGCAGTTCAGCAAGGTGCGGTGCCCCATTGTTGAGAGTCTCACGAACTCTCTCATGATGCACGGTAGAAACAATGGCAAGAAACTCATGGCTATTAGGATCATGAAGCATGCTATGGAGATTATTCATTTGTTGACTGACCACAACCCCATTTAG 501 0.4032 MKSGKVVVVKKLLSGKSSKINDVFESEVTLLGCCSKGQDRILVYEYMANNSLEKFLFVLEIISGRKSTDVNVIDDDGEHNYFLRQVTDISLADYVEVAASKHATYVPHTTEKYLVKQFSKVRCPIVESLTNSLMMHGRNNGKKLMAIRIMKHAMEIIHLLTDHNPI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02110 166 Pfam Ribosomal protein S7p/S5e 115 166 IPR023798 -
Gma11g02110 166 PANTHER RIBOSOMAL PROTEIN S7 85 166 IPR000235 GO:0006412
Gma11g02110 166 SUPERFAMILY Protein kinase-like (PK-like) 2 60 IPR011009 -
Gma11g02110 166 ProSitePatterns Ribosomal protein S7 signature. 127 153 IPR020606 GO:0003723|GO:0003735|GO:0006412
Gma11g02110 166 Gene3D Transferase(Phosphotransferase) domain 1 1 80 - -
Gma11g02110 166 PANTHER 40S RIBOSOMAL PROTEIN S5 85 166 - -
Gma11g02110 166 SUPERFAMILY Ribosomal protein S7 84 166 IPR036823 -
Gma11g02110 166 Gene3D Ribosomal protein S7 domain 81 166 IPR036823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02110 Gma-Chr11 35575679 35577573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02110 86 166 Cytoplasmic Ribosomal Protein Gene Family AT3G11940 76.543 2.57e-42 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02110 K02989 - tcc:18599204 138.272