Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02106 ATGCAACTGAAGCTCGTAGTCTTAACCTTGTCGATATTTTGGCCATGGTGGAGCTTTGAGGGTGCTGTAGGAGACCCTCAACTCTTTTTCCTCACATTTGAATGCAGCACAGTCTCGGCACGCGACTTGTCCAACTTGTATCAAAATCGAAACGCAAGTTTCGCTGCCCTGAGATCGCAGGTTAGCAACCAAAGCAAGCACTTTGCCGCGGCTCAATCAACCAGTGGATCAGACCCTGTCTATGCAACGTTCCAATGCAGGAACTACCTTTCCAACACAGACTGCACCACCTGCTTTGACGCGGCTGCTGCCAATATCCGCAACTGCTCCACCGGAAATACTGCTCATCTTGTTTATGACGGCTGTATCCTCAGGTACTTGAACAGTGTGTTCTTGGACAACAGTATCATTTTTAGCAGCCACACATTTTGTGGAAATCAGACTGCCGATGAAAGCACTGCTTTTGGAACAGTTGGACGACAAGTGCTGATGGATCTACAAATAGCAATACCCAAAATTAGTGGCTACTTTGCAGCTACCAAGACACAAGTGGCTGGCGGTGCAATGTATGCCTTTGCACAATGTGCTGAAACTCTCACACGCGACACTTGTTCGAATTGTTTGTCAAATCAGCTGAGCAACATACAAGGTTGTCTTCCCAATACAAATGGTAGGGCAATTGACCCTGCTGGATGCTTTATGAGATACTCGGAGACACCCTACTTTGCTGATAACCAAACCACTGATATCAGTCTCTTCTTAAAACAAGGACCAGGAGGTTCAATGAGTAAGTGGGTCACTATTGGTGGTGGTCTTGCAGGTGCACTCCTTGTTGTGATCCTTCTTTCATTATTTCCTTGGTATAGAAGATCCCAAAGTCCAAAGAGAGTTCCTAGAGCAGCTTACACATTGGGAGCAACTGAGttgaaagctgcaacaaagtacaagtatagtgacttgaaagctgcaacaaaaaattttagtgaGAAAAATAAGCTAGGAGAAGGAGGCTTTGGTGCTGTATACAAGGGGACAATGAAAAATGGGAAAGTTGTTGCAGTAAAAAAGTTACTTTCGGGGAAATCCAGCAAGATCGATGACGAATTTGATAGTGAAGTAACACTTATAAGTAATGTTCATCACAAAAATCTGGTTCGACTTCTTGGTTGTTGTAGTAAAGGCCAAGACAGAATTCTTGTTTACGAATACATGGCAAACAACAGCCTTGACAAATTCTTATTTGGTAAAAAAAAAGGTTCACTCAACTGGAGACAACGGTATGATATAATTTTGGGCACAGCTAGGGGATTGGCCTATCTACATGAGGAATTTCATGTTTCTGTCATACATAGAGATATCAAGAGTGGAAATATTCTTTTGGATGAAGAACTTCAGCCTAAAATTGCAGATTTTGGATTGGCAAAGCTGCTTCCAAGCGACCAATCTCATCTTAGCACAAGATTTGCTGGAACATTGGGATACACAGCACCTGAGTATGCACTCCATGGTCAATTATCAAAAAAGGCTGATACATACAGCTATGGAATTGTAGTTCTAGAAATCATAAGTGGTCGAAAGAGTACTGATGTGAATGTTGTTAATGATGATAATGAGGATGATTACCTTCTTCGACAAGCATGGAAATTGTATGAGAGTGGCAAGCACTTGGAGTTAGTGGATAAAAGCTTAAACCTTAATAACTATGATTCAGAAGAAGTGAAGAAAGTGATAGGCATTGCTTTGTTGTGCACTCAAGCATCGTCTGCAATGCGGCCAGCCATGTCTGAAGTAGTAGTCCAACTCAATAGCAATGACTTACTTGAGCATATGAGACCTTCGATGCCTATCTTTTTTGAGTCAAATTTAAGGGCCCCTTAA 1878 0.4111 MQLKLVVLTLSIFWPWWSFEGAVGDPQLFFLTFECSTVSARDLSNLYQNRNASFAALRSQVSNQSKHFAAAQSTSGSDPVYATFQCRNYLSNTDCTTCFDAAAANIRNCSTGNTAHLVYDGCILRYLNSVFLDNSIIFSSHTFCGNQTADESTAFGTVGRQVLMDLQIAIPKISGYFAATKTQVAGGAMYAFAQCAETLTRDTCSNCLSNQLSNIQGCLPNTNGRAIDPAGCFMRYSETPYFADNQTTDISLFLKQGPGGSMSKWVTIGGGLAGALLVVILLSLFPWYRRSQSPKRVPRAAYTLGATELKAATKYKYSDLKAATKNFSEKNKLGEGGFGAVYKGTMKNGKVVAVKKLLSGKSSKIDDEFDSEVTLISNVHHKNLVRLLGCCSKGQDRILVYEYMANNSLDKFLFGKKKGSLNWRQRYDIILGTARGLAYLHEEFHVSVIHRDIKSGNILLDEELQPKIADFGLAKLLPSDQSHLSTRFAGTLGYTAPEYALHGQLSKKADTYSYGIVVLEIISGRKSTDVNVVNDDNEDDYLLRQAWKLYESGKHLELVDKSLNLNNYDSEEVKKVIGIALLCTQASSAMRPAMSEVVVQLNSNDLLEHMRPSMPIFFESNLRAP 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02106 625 Pfam Salt stress response/antifungal 43 128 IPR002902 -
Gma11g02106 625 Pfam Salt stress response/antifungal 147 238 IPR002902 -
Gma11g02106 625 ProSiteProfiles Gnk2-homologous domain profile. 137 241 IPR002902 -
Gma11g02106 625 CDD STKc_IRAK 333 602 - -
Gma11g02106 625 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 612 - -
Gma11g02106 625 Gene3D Phosphorylase Kinase; domain 1 291 403 - -
Gma11g02106 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Gma11g02106 625 SUPERFAMILY Protein kinase-like (PK-like) 311 601 IPR011009 -
Gma11g02106 625 Gene3D - 29 131 IPR038408 -
Gma11g02106 625 Gene3D - 138 241 IPR038408 -
Gma11g02106 625 Gene3D Transferase(Phosphotransferase) domain 1 404 611 - -
Gma11g02106 625 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 18 612 - -
Gma11g02106 625 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Gma11g02106 625 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Gma11g02106 625 Pfam Protein kinase domain 327 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02106 625 ProSiteProfiles Protein kinase domain profile. 327 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02106 625 SMART serkin_6 327 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02106 Gma-Chr11 35503662 35507313 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02106 18 622 Receptor kinase-like Gene Family AT1G70520 36.538 3.21e-120 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma11g02106 Pkinase 6.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02106 - - gmx:100786836 1217.6