Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02104 ATGCAACTAAAGCTCGTAGCCTTAACCTTGTCGATATTTTGGCCATGGTGGAGCTTTGAGGGTGCTGTAGGAGACCCTCAACTCTTTTTCCTCACATTTGAATGCAGCACAGTCTCGGCACGCGACTTGTCCAACTTGCATCAAAATCGAAACGCAAGTTTCGCTGCCCTGAGATCGCAGGTTAGCAACCAAAGCAAGCACTTTGCCGCGGCTCAATCAACCAGTGGATCAGACCCTGTCTATGCAACGTTTCAATGCAGGAACTACCTTTCCAACACTGACTGCACCACCTGCTTTGACGCGGCTGCTGCCAATATCCGCAACTGCTCCACCGGAAATACTGCTCATCTTGTTTATGACGGCTGTATCCTCAGGTACTTGAACAGTGTGTTCTTGGACAACAGTATCATTTTTAGCAGCCACACATTTTGTGGAAATCAGACTGCAGATGAAAGCACTGCTTTTGGAACAGTTGGACTACAAGTGCTGATGGATCTACAAATAGCAACACCCAAAATTAGTGGCTACTTTGCAGCTACCAAGACACATGTAGCAGGCGGTGCAATCTATGCTTTTGCACAATGTGCTGAAACTCTCACACCCGACACTTGTTTGAATTGTTTGTCAAATCAACTGAGCAACATACAAGGTTGTCTTCCCAATACAAATGGTAGGGCAATTGACCCTTCTGGATGCTTTATGAGATACTCGGAGACACCCTACTTTGCTGATAACCAAACCACTGATATCAGTCTCTTCTTAAAACAAGGACCAGGAGGTTCAATGAGGAAGTGGGTCACTATTGGTGGTGGTCTTGCAGGTGCACTCCTTGTTGTGATCCTTCTATCATTATTTTTTTGGTATAGAAGATCTCAAAGTCCAAAGAGAGTTCCTAGAGcttacacattgggagcaaCTGAGTTGAAAGCTGTAACAAAGTACAAGTATAGTGACTTGAAAGCTGCAACAAAAAATTTTAGTGAGAAAAATAAGCTAGGAGAAGGAGGCTTTGGTGCTGTATACAAGGGGACAATGAAAAATGGGAAAGATGTTGCAGTAAAAAAGTTACTTTCAGGAAAATCCAGCAAGATCGATGATGAATTTGAGAGTGAAGTAACGCTTATAAGTAATGTTCATCACAAAAATCTGGTTCGACTTCTTGGTTGTTGTAGTAAAGGCCAAGAAAGAATTCTTGTTTACGAATACATGGCAAACAACAGCCTTGACAAATTCTTATTTGGTAAAAGAAAAGGTTCACTCAACTGGAGACAACGGTATGATATAATTTTGGGCACGGCTAGGGGATTGGCCTATCTACATGAGGAATTTCATGTTTCTGTCATACATAGAGATATCAAGAGTGGAAATATTCTCTTGGATGAAGAACTTCAGCCTAAAATTGCTGATTTTGGATTGGCGAAGCTGCTTCCAGGGGACCAATCTCATCTTAGCACAAGATTTGCTGGGACATTGGGATACACAGCACCTGAGTATGCACTCCATGGTCAATTATCAGAAAAGGCTGATACATACAGCTATGGAATTGTAGTTCTAGAAATCATAAGTGGTCGAAAGAGTACTAATGTGAATGTTGTTGATGATGATATTGAGGATGATTACCTTCTTCGACAATCATGGACATTGTATGAGAGTGGCAAGCACTTGGAGTTAGTGGACAAAACCTTAAACCCTAATAAGTATGATCCAGAAGAAGTGAAGAAAGTGATAGGCATTGCTTTGTTGTGCACTCAAGCATCGCCTGCAATGCGGCCAGCCATGTCTGAAGTAGTAGTCCAACTCAGTAGCAATGACTTACTTGAGCATATGAGACCTTCGATGCCTATCTTTTTTGAGTCAAATTTAAGGGCCCCTTAA 1875 0.4176 MQLKLVALTLSIFWPWWSFEGAVGDPQLFFLTFECSTVSARDLSNLHQNRNASFAALRSQVSNQSKHFAAAQSTSGSDPVYATFQCRNYLSNTDCTTCFDAAAANIRNCSTGNTAHLVYDGCILRYLNSVFLDNSIIFSSHTFCGNQTADESTAFGTVGLQVLMDLQIATPKISGYFAATKTHVAGGAIYAFAQCAETLTPDTCLNCLSNQLSNIQGCLPNTNGRAIDPSGCFMRYSETPYFADNQTTDISLFLKQGPGGSMRKWVTIGGGLAGALLVVILLSLFFWYRRSQSPKRVPRAYTLGATELKAVTKYKYSDLKAATKNFSEKNKLGEGGFGAVYKGTMKNGKDVAVKKLLSGKSSKIDDEFESEVTLISNVHHKNLVRLLGCCSKGQERILVYEYMANNSLDKFLFGKRKGSLNWRQRYDIILGTARGLAYLHEEFHVSVIHRDIKSGNILLDEELQPKIADFGLAKLLPGDQSHLSTRFAGTLGYTAPEYALHGQLSEKADTYSYGIVVLEIISGRKSTNVNVVDDDIEDDYLLRQSWTLYESGKHLELVDKTLNPNKYDPEEVKKVIGIALLCTQASPAMRPAMSEVVVQLSSNDLLEHMRPSMPIFFESNLRAP 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02104 624 Gene3D Transferase(Phosphotransferase) domain 1 403 610 - -
Gma11g02104 624 Pfam Protein tyrosine and serine/threonine kinase 329 600 IPR001245 GO:0004672|GO:0006468
Gma11g02104 624 ProSiteProfiles Protein kinase domain profile. 326 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02104 624 SMART serkin_6 326 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02104 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Gma11g02104 624 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 610 - -
Gma11g02104 624 Gene3D Phosphorylase Kinase; domain 1 291 402 - -
Gma11g02104 624 CDD STKc_IRAK 332 597 - -
Gma11g02104 624 SUPERFAMILY Protein kinase-like (PK-like) 310 600 IPR011009 -
Gma11g02104 624 Gene3D - 138 241 IPR038408 -
Gma11g02104 624 Gene3D - 28 131 IPR038408 -
Gma11g02104 624 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Gma11g02104 624 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 18 610 - -
Gma11g02104 624 Pfam Salt stress response/antifungal 148 238 IPR002902 -
Gma11g02104 624 Pfam Salt stress response/antifungal 41 128 IPR002902 -
Gma11g02104 624 ProSiteProfiles Gnk2-homologous domain profile. 137 241 IPR002902 -
Gma11g02104 624 ProSitePatterns Protein kinases ATP-binding region signature. 332 355 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02104 Gma-Chr11 35404578 35408264 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02104 18 621 Receptor kinase-like Gene Family AT1G70520 37.296 1.01e-120 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma11g02104 PK_Tyr_Ser-Thr 8.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02104 - - gmx:100785255 1217.6