Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02102 ATGGTGCAACTCAAGGTCGTAGCCTCAACCTTGTTGGTGTTGTGGTCATGGTGGAGCTTTGAGGGTGCAGTTGGAGACCCTCAACTCTTTTTACTCAAATGGGAGTGCAGCGTAGTCGCAGTACACGACTTGCTCAACTTCAACCAAAATCTAAACGCAAGTTTGGTCGACCTTAGAGCACAAGTGAGCAACCAAAGAAAACACTTTGCCACGGCTCAATCAACCAGCGGAGCAGACCCAGTCCATGCCATGTTCCAATGCAGGAACTACCTCTCCATCACTGACTGCACCACCTGCTTTGCCACCGCTGCCACCAGAATTCACAACTGCTCCACTGGAAACGGTGCCCATGTCGTGTATGACGGCTGCATCCTCAGGTACGAGAACAATGAATTCTTGGATCACAGTCTCAGTTCTACCCTCCACACACTTTGCGGAAATGAGACAGCAGATGAAAGCACTGCTTTTGGTACAGTTGGACGGCAAGCTCTGATGGATCTACAAATAGCAACACCAAAAATTGGTGGCTACTTTGCAGCTACCAAGACACAAGTGGCTGGTGGTGCGATCTATGCCTTTGCTCAATGTGTTGAAACTCTCACGCAAGAAACCTGTTCGGACTGTTTGTCAATTGCACAGAGTGGCATACAAGATTGTCTTCCAAAGACAAATGGTCGGGGAGTCAATCCTCCAGTGTGCTTTATGAGATACTCGGAGAAACCTTTCTTTGCAGATAACCAAACCATTGATATCAGTCTCTTCTTAAAACAAGGAGGAGGAGGTTCAATCAAGAAGTGGCTTGTTATTGGTGGTGGTGTTTCAAGTGCACTCCTTGTTCTGATCCTTATTTCATTATTTCGGTGGCATAGAAGATCCCAAAGTCCCACTAAAGTTCCTAGAAGTACCATAATGGGAGCGTCCAAGTTGAAAGGGGCAACCAAGTTCAAGTATAGTGACTTGAAAGCTGCAACAAAAAATTTTAGTGAGAAAAATAAACTTGGAGAAGGAGGCTTTGGTGCTGTATACAAGGGAACTATGAAAAACGGGAAAGTTGTTGCAGTCAAAAAATTAATTTCAGGAAATTCCAGCAACATAGATGATGAATTTGAAAGTGAAGTAACGCTTATAAGTAATGTTCATCATAGAAATCTTGTTCGGCTTCTTGGTTGTTGCAATAAAGGCCAAGAAAGAATCCTTGTTTACGAATACATGGCAAACGCCAGCCTAGACAAATTCTTATTTGGAAAAAGAAAAGGCTCCCTCAACTGGAAACAACGGTATGATATAATTTTGGGCACAGCAAGGGGATTGAATTATCTACATGAGGAATTTCATGTTTCTATCATACATAGAGATATTAAGAGTGAAAATATCTTATTGGATGAACAACTTCAACCCAAAGTTTCTGATTTTGGGCTGGTGAAGCTCCTACCAGAAGACCAATCTCATCTTACCACAAGATTTGCTGGGACATTGGGATACACAGCACCTGAGTATGCACTCCATGGTCAATTATCAGAAAAGGCTGATATATACAGCTATGGAATTGTAGTCCTTGAGATTATAAGTGGTCAAAAGAGTATTGATTCCAAGGTCATTGTTGTTGATGATGGTGAGGATGAATACCTTCTTCGACAAGCTTGGAAGTTATATGTGAGAGGCATGCACTTGGAGTTAGTGGACAAAAGCTTAGACCCTAATAGTTATGATGCAGAAGAAGTGAAGAAAATCATAGGCATTGCTTTGATGTGCACTCAATCATCAGCTGCAATGAGGCCATCCATGTCTGAAGTAGTAGTCCTACTCAGTGGCAATCACTTACTTGAGCATATGAGACCTTCTATGCCTCTCTTTATTCAGTTGACGAATTTAAGGCCCCACAGAGATATCTCTGCTTCAACTGGTTCCTCTACGACTAATGCTACTATCTCAAATTCTATAGTACCCACCCAATGA 1956 0.4259 MVQLKVVASTLLVLWSWWSFEGAVGDPQLFLLKWECSVVAVHDLLNFNQNLNASLVDLRAQVSNQRKHFATAQSTSGADPVHAMFQCRNYLSITDCTTCFATAATRIHNCSTGNGAHVVYDGCILRYENNEFLDHSLSSTLHTLCGNETADESTAFGTVGRQALMDLQIATPKIGGYFAATKTQVAGGAIYAFAQCVETLTQETCSDCLSIAQSGIQDCLPKTNGRGVNPPVCFMRYSEKPFFADNQTIDISLFLKQGGGGSIKKWLVIGGGVSSALLVLILISLFRWHRRSQSPTKVPRSTIMGASKLKGATKFKYSDLKAATKNFSEKNKLGEGGFGAVYKGTMKNGKVVAVKKLISGNSSNIDDEFESEVTLISNVHHRNLVRLLGCCNKGQERILVYEYMANASLDKFLFGKRKGSLNWKQRYDIILGTARGLNYLHEEFHVSIIHRDIKSENILLDEQLQPKVSDFGLVKLLPEDQSHLTTRFAGTLGYTAPEYALHGQLSEKADIYSYGIVVLEIISGQKSIDSKVIVVDDGEDEYLLRQAWKLYVRGMHLELVDKSLDPNSYDAEEVKKIIGIALMCTQSSAAMRPSMSEVVVLLSGNHLLEHMRPSMPLFIQLTNLRPHRDISASTGSSTTNATISNSIVPTQ 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02102 651 CDD STKc_IRAK 333 599 - -
Gma11g02102 651 Pfam Protein kinase domain 327 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02102 651 Gene3D Transferase(Phosphotransferase) domain 1 404 612 - -
Gma11g02102 651 ProSiteProfiles Protein kinase domain profile. 327 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02102 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Gma11g02102 651 Pfam Salt stress response/antifungal 46 129 IPR002902 -
Gma11g02102 651 Pfam Salt stress response/antifungal 149 239 IPR002902 -
Gma11g02102 651 Coils Coil 48 68 - -
Gma11g02102 651 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 644 - -
Gma11g02102 651 SUPERFAMILY Protein kinase-like (PK-like) 313 635 IPR011009 -
Gma11g02102 651 SMART serkin_6 327 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02102 651 ProSiteProfiles Gnk2-homologous domain profile. 138 242 IPR002902 -
Gma11g02102 651 Gene3D - 31 132 IPR038408 -
Gma11g02102 651 Gene3D - 138 242 IPR038408 -
Gma11g02102 651 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 18 644 - -
Gma11g02102 651 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Gma11g02102 651 Gene3D Phosphorylase Kinase; domain 1 289 403 - -
Gma11g02102 651 MobiDBLite consensus disorder prediction 630 651 - -
Gma11g02102 651 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02102 Gma-Chr11 35376822 35387534 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02102 12 646 Receptor kinase-like Gene Family AT1G70520 36.055 6.41e-124 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma11g02102 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02102 - - gmx:100784716 1258.05