Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02092 ATGGTGCAACTAAAGCTCATAGCCTTAACCTTGTCGGTGTTGTGGTCATGGTGGAGTTTTGAGGGTGCAGTTGGAGACCCTCAACTCTTTCTACTCAAATGGGAGTGCGGCGTAGTCTCGGTTCATGACTTGTCCAACTTCAACCAAAATCGTAACGCAAGTTTGGCAGACCTGAGATTGCAGCTAGTGAGCAACCAAAGCAAGCACTTTGTCACGGCTCAATCAACCACTGGAGCAGACCCTGTCTATGCTATGTTCCAATGCCGGAACTACCTCTCCAACACTGACTGCACCGCCTGCTTAGCTGCCGCCACCACCAATATCCGCAACTGCTCCACGGGAAATACTGCCCGTATCGTTTATGACGGCTGTATCCTTAGGTACGAGAACAATGAGTTCTTGGACCAGAATATCAATTCTATCAGCCACACAATATGTGGAAATGAGACTGCAGATGAAAGCACTGCTTTTGGTGAAGTTGGACAGCAAGTGCTGATGGATCTACAAATAGCAACACCCAAAATTAGTAGCTACTTTACAGCTACCAAGACACAAGTGGCTGGTGTTACAATCTATGCCATTGCACAATGTGCTGAAACTCTCACACAAGACACTTGTTCGAATTGTTTGTCAATTGCACAGAGCGGCATACAAGATTGTCTTCCAGATACAAATGGTAGGGGAGTCAATCCTCCTGTGTGCTTTATGAGATACTCGGAGACACCTTTCTTTGCTGACAACCAAACCACTGATATCAGCCCCTTATTAAAACAAGGAGGAGGGGGTTTAATGAAGAAGTGGGTCGTTATTGGTGGGGGTGTTGCATGTGCACTCCTTATTCTGACACTTATTTCATTATTTGCTTGGTCTAGAAGATCCCAAAGTCCCAAGAGAGTTCCTAGAAGTACCATAATGGGAGCAACTGAGTTGAAAGGTCCAATCAAGTACAAGTATAATGACTTGAAAGCTGCAACAAAAAAATTTAGTGAGAAAAATAAATTAGGCGAAGGAGGCTTTGGCGCTGTATACAAGGGGGCTATGAAAAATGGGAAAGATGTAGCAGTCAAAAAATTAAATATTCCAGGAAATTCCAGCAAGATAGATGACTTGTTTGAAAGTGAAGTAATGCTTATAAGTAATGTTCATCACAAAAATCTTGTTCAGCTTCTTGGTTATTGCAGTAAAGGCCAACAAAGAATCCTTGTTTACGAATACATGGCAAACACTAGCCTAGACAAATTCGTATTTGGAAGAAGAAAAGGTTCCCTCAACTGGAAACAACGGTATGATATAATTTTGGGCATTGCAAGGGGATTGACTTATTTACATGAGGAATTTCATGTTTGTATCATACATAGAGATATTAAGAGTAGCAATATCCTCTTGGATGAACAACTTCAACCCAAAATTTCTGACTTTGGGTTGGTGAAACTCTTACCTGGGGACCAATCTCATCTTAGCACAAGAGTTGTTGGAACATTGGGATACATAGCACCTGAGTATGTACTCCATGGTCAATTATCAGAAAAGGCTGATACATACAGCTTTGGAATTGTAGTCTTAGAAATCATAAGCGGTCAAAAGAGTACTGATGTAAAAGTTGATGATGATGATAATGAAGAATATCTTCTTCGGCAAGCATTGAAGTTGTATGCGAAAGGCATGGTCTTCGAGTTTGTGGACAAAAGCTTAAACCCTAATAACTATGATGTAGAAGACGTGAAGAAAGTCATAGGCATTGCTTTAATGTGCACTCAAGCATCAGCTGCAATGAGGCCAGCCATGTCTGACGTAGTAGTTCTACTCAATGGCAATGACTTACTTGAGCATATGAGACCTTCAATGCCTATCTTAATTCAGTCGAATTTAAGGTCCGATAAAGATATCTCTGCTTCAATTGGTTCCTTTACGTCTGATACTACTACCTCCAATTCTATAGTACCAACTCAATGA 1953 0.4137 MVQLKLIALTLSVLWSWWSFEGAVGDPQLFLLKWECGVVSVHDLSNFNQNRNASLADLRLQLVSNQSKHFVTAQSTTGADPVYAMFQCRNYLSNTDCTACLAAATTNIRNCSTGNTARIVYDGCILRYENNEFLDQNINSISHTICGNETADESTAFGEVGQQVLMDLQIATPKISSYFTATKTQVAGVTIYAIAQCAETLTQDTCSNCLSIAQSGIQDCLPDTNGRGVNPPVCFMRYSETPFFADNQTTDISPLLKQGGGGLMKKWVVIGGGVACALLILTLISLFAWSRRSQSPKRVPRSTIMGATELKGPIKYKYNDLKAATKKFSEKNKLGEGGFGAVYKGAMKNGKDVAVKKLNIPGNSSKIDDLFESEVMLISNVHHKNLVQLLGYCSKGQQRILVYEYMANTSLDKFVFGRRKGSLNWKQRYDIILGIARGLTYLHEEFHVCIIHRDIKSSNILLDEQLQPKISDFGLVKLLPGDQSHLSTRVVGTLGYIAPEYVLHGQLSEKADTYSFGIVVLEIISGQKSTDVKVDDDDNEEYLLRQALKLYAKGMVFEFVDKSLNPNNYDVEDVKKVIGIALMCTQASAAMRPAMSDVVVLLNGNDLLEHMRPSMPILIQSNLRSDKDISASIGSFTSDTTTSNSIVPTQ 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02092 650 Gene3D Transferase(Phosphotransferase) domain 1 406 612 - -
Gma11g02092 650 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Gma11g02092 650 SUPERFAMILY Protein kinase-like (PK-like) 310 602 IPR011009 -
Gma11g02092 650 CDD STKc_IRAK 334 604 - -
Gma11g02092 650 Pfam Protein kinase domain 328 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02092 650 Pfam Salt stress response/antifungal 146 240 IPR002902 -
Gma11g02092 650 Pfam Salt stress response/antifungal 43 130 IPR002902 -
Gma11g02092 650 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 18 640 - -
Gma11g02092 650 ProSiteProfiles Protein kinase domain profile. 328 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02092 650 Gene3D - 30 133 IPR038408 -
Gma11g02092 650 Gene3D - 138 243 IPR038408 -
Gma11g02092 650 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Gma11g02092 650 SMART serkin_6 328 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02092 650 Gene3D Phosphorylase Kinase; domain 1 290 405 - -
Gma11g02092 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Gma11g02092 650 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 640 - -
Gma11g02092 650 ProSiteProfiles Gnk2-homologous domain profile. 139 243 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02092 Gma-Chr11 35056020 35107307 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02092 19 630 Receptor kinase-like Gene Family AT1G70520 35.360 2.11e-115 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma11g02092 Pkinase 2.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02092 - - gmx:100776689 1220.3