Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02090 ATGAACTGGTGGTCGAGAGAGGAGACAATGGCTTTGCTCAAGATAAAGTGCAAAATGGACGTTGCTTTCAAAGACGCAAACCCTAAAGCCTTTCTCTGGGAACAAGTATCAAGATGGAAACCACTCACTTCCTCCTCCGACAACACTCAGGTATTGGAGTTCAGCTTCCTGGGAAAAGGTAGTAAACTCAGCTGCTTTCTGGAATGGGTTGCGGGTGTAGAAGCTGAAGAAATTGTGAGAGAGAACAAGGAGGATTACAACAAGTTCTATGAGGCTTTCTCTAAGAACTTGAAGCTTGGTATCCATGAGGATTCATATAACAAGGGAAAGATTGTTGAATTGCTCAAGTACTACTCCACCAAGAGTGGTGATAAGATGAGGAAGGTCAGAGTGAAATCTACTACATCACAGCTCAAGGAATTTGAGAGCAAGAAGTTTGTCTCTGCCACCAAGGAAGGGCTCAAGCTTGACAAGAATGAAGATGAGAAGAAGAAGCAAGAAGAGTTGAAGGAGAAGTTTGACAACCCCTGCAAAGTGATCAAGGATGACAAATCTATGAAGGATCTTATTCTGTTTCTGTTTGAGACTGCTCTTCTCACTTCTAGTTTCAGCCGTGAAGGATCCACATAA 630 0.4286 MNWWSREETMALLKIKCKMDVAFKDANPKAFLWEQVSRWKPLTSSSDNTQVLEFSFLGKGSKLSCFLEWVAGVEAEEIVRENKEDYNKFYEAFSKNLKLGIHEDSYNKGKIVELLKYYSTKSGDKMRKVRVKSTTSQLKEFESKKFVSATKEGLKLDKNEDEKKKQEELKEKFDNPCKVIKDDKSMKDLILFLFETALLTSSFSREGST 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02090 209 PANTHER HEAT SHOCK COGNATE PROTEIN 80 79 130 - -
Gma11g02090 209 PANTHER HEAT SHOCK COGNATE PROTEIN 80 134 182 - -
Gma11g02090 209 Pfam Hsp90 protein 79 127 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Gma11g02090 209 Pfam Hsp90 protein 134 182 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Gma11g02090 209 Gene3D - 4 53 - -
Gma11g02090 209 Gene3D - 81 134 - -
Gma11g02090 209 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 134 182 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Gma11g02090 209 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 79 130 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Gma11g02090 209 Coils Coil 151 171 - -
Gma11g02090 209 SUPERFAMILY Ribosomal protein S5 domain 2-like 78 151 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02090 Gma-Chr11 35021368 35023648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02090 2 38 Trihelix Transcription Factor Family AT1G33240 62.162 1.19e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma11g02090 HSP90 8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02090 K04079 - gmx:100819568 120.553