Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02089 ATGGATACTCCTAGGATACGTATCCGGCCATATTCGTGGAGTATCGGTGTCGGATATGGGTGCGACACCGATACTTTTCCTTTTTTCACGTATCCGGGCTTCACAGATCATAACACAGAAGAAGCTCATCCAAGTTCAGATGTCAAGGTCCAAGAAACATGTCCAAGTTCAGATGTCAAGACTCCACACAATGACTCACAAGAAACTACCGAGGCAACTTCATCCACGAGGGGTTCAAATCTAAATGAGATAATGGCAGATAGGGCAGAGACGAGCAACCAACAAAATGCTATGGCTAAAAGCAGTAATGATGAGACATTCAATGAGGAAGTGGAAAGTTACCAGAAGTATGCCGAAACCAGTTATGAGGAGACAGTAGAAAAGGCAAGTAATCAGAACTATGCTGAGAGCAGTTATGGTGATGAGATGGAGGAAGAGGTAGAGGAAATTGAACAGAATTTCTATGAAACTAATTATGATTGGATCAGTGAAATTTCTAGGCCTAGGAGCTATTGGGAAGAGCGCAGGCAAGCATGGTATAGAGAGATGCTTGAAAATGGTTCTCAAAATGAGGATATACGAAGGCTTCTTGACAGAAGAACAGTGTCAAGTTTCCTTTCTAGTGACTTCAGGGATAGAATGGATAGATTGATGGAATCTCATAGGGGAACACAAACACATCTAGTCAGTAGTCAAGACTGTATATATGGCTATGCTGCTCCAGAGATTCCACAAAACAATACATTAACAGAAAAATGCGATGTCTACTCTTTTGGTGTAGTTCTACTAGAAGTGGTGTGCAAAGACAAGCTAGTAAATGTTGAAAACAGGCAGAAACACCCTGTTGAGGAGAATATTGATCCTAATCTCAAAGGCAAGATTGCCCCAGAGTGTTGGAAAGCATTTATTGATATCACAGAAATATGTTTGAAGTTTGATCCAAATGAGTGA 951 0.4101 MDTPRIRIRPYSWSIGVGYGCDTDTFPFFTYPGFTDHNTEEAHPSSDVKVQETCPSSDVKTPHNDSQETTEATSSTRGSNLNEIMADRAETSNQQNAMAKSSNDETFNEEVESYQKYAETSYEETVEKASNQNYAESSYGDEMEEEVEEIEQNFYETNYDWISEISRPRSYWEERRQAWYREMLENGSQNEDIRRLLDRRTVSSFLSSDFRDRMDRLMESHRGTQTHLVSSQDCIYGYAAPEIPQNNTLTEKCDVYSFGVVLLEVVCKDKLVNVENRQKHPVEENIDPNLKGKIAPECWKAFIDITEICLKFDPNE 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02089 316 MobiDBLite consensus disorder prediction 91 142 - -
Gma11g02089 316 Pfam Protein kinase domain 229 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02089 316 PANTHER BNAC05G24000D PROTEIN 38 233 - -
Gma11g02089 316 MobiDBLite consensus disorder prediction 113 138 - -
Gma11g02089 316 MobiDBLite consensus disorder prediction 49 79 - -
Gma11g02089 316 MobiDBLite consensus disorder prediction 40 79 - -
Gma11g02089 316 SUPERFAMILY Protein kinase-like (PK-like) 228 315 IPR011009 -
Gma11g02089 316 PANTHER BNAC05G24000D PROTEIN 38 233 - -
Gma11g02089 316 Gene3D Transferase(Phosphotransferase) domain 1 205 316 - -
Gma11g02089 316 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02089 Gma-Chr11 34989686 34994456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02089 39 310 Receptor kinase-like Gene Family AT2G39360 25.763 5.55e-17 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gma11g02089 Pkinase 3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02089 - - gmx:100796627 342.428