Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02086 ATGGTGCAACTCAAGCTCGTGGCATTAACTTTGTTGGTGTTGTGGTCATGGTGGAACTTTGAGGGTGCAGTTGGAGACCCTCAAACCCTTATACTCAAATTTGAGTGCAGTGTAGTCTCGGTACACGACTCGGCCAACTTCTTCCAAAATCTAAACGCTAGTTTGGCAAACCTGAAATCGCAGCTGGTGAGCAACCAAAGCAAGCACTTTGTCACGGCTCAATCAACCACCGGAACGGATCCTGTCTATGCAATGTTCCAATGCAGGAACTACCTCTCCAACACTGACTGCGTCACCTGTTTCGCTGTGGCCGCAGCCACAGTCCGCAACTGCTCCACCATGAATACTGCCCGTGCCATTTATGATGGCTGCATCCTCAGGTACGAGAACAATGACTTCTTCAAGCAGAATCTCATTTCTAGCATCCACACACTTTGTGGAAATCAGACTGCAGATGAAAGCACTGGTTTTGGTGCAGTTGGACGCCAAGTGCTGATGGATCTACAAATAGCAACACCAAAAATTAGTGGCTACTTTGCAGCTACCAAGACACAAGTGGAAGGCGGTGCAATCTATGCCATTGGACAATGTGCTGAAACTCTCACACAAGACACTTGTTTGGATTGTTTGTCAGCAGAACAGAGAGACTTACAAGATTGTCTTCCCAGTACAAATGGTAGGGGATTCGATCCTCCTGTGTGCTTTATGAGATACTCGGCGACACCCTTCTTTGCTGATAACCAAACCATTGATATCACTTCCTTTTTAAAACAAGGAGAAGAAGGTTCAATCAAGAAGTGGGCCATTATTGGTGGTGGTGTAGTAGGTGCACTCCTTGTTGTGATCCTTATTCCATTATTACCCAGGCATAGCGGATCCCAAAGTCCTAAGAGAGTTCCTAGAAGTACCATAATGGGAGCAACTGAGTTGAAAGCTCCAACCAAGTACAAGTATAGTGACTTGAAAGCTGCAACAAAAAATTTTAGCGAGAAAAATAAATTAGGAGAAGGAGGCTTTGGTGCAGTATACAAGGGAACCATGAAAAATGGAAAAATTGTTGCTGTCAAGAAATTAATTTCAGGAAATTCCAACCAGATGGATGATGAATTTGAAAGTGAAGTAACAGTTATAAGTAATGTTCATCATAGAAATCTTGTTCGGCTTCTTGGTTGTTGCAGTATAGGCGAAGAAAGAATCCTTGTTTATGAATACATGGCAAACACCAGCTTAGACAAATTCATATTTGGAAAAAGAAAAGGTTCCCTCAACTGGAAACAACGCTACGATATAATTTTGGGCACAGCAAGGGGATTGACTTATCTACATGAGGAATTTCATGTTTCTATCATACATAGAGATATTAAGAGTGGCAACATCCTCTTGGATGAACAACTTCAGCCCAAAATTTCTGACTTTGGGTTGGTGAAACTCCTTCCAGGGGATAAATCTCATATTCGCACAAGAGTTGCAGGAACATTGGGATACACAGCACCTGAATATGTACTCCAAGGTCAATTATCAGAAAAGGCTGATACATACAGCTATGGAATTGTAGTATTAGAAATCATAAGTGGTCAAAAGAGTACAGATGTGAAAGTTGATGATGATGGTGATGAAGAATATCTTCTTCGACGAGCATGGAAGTTGCATGAGAGAGGCATGCTTTTGGAGTTAGTGGACAAAAGCTTAGACCCTAATAACTATGACGCAGAAGAAGTGAAGAAAGTCATAAGCATTGCTTTGTTGTGCACTCAAGCATCGGCTGCAATGAGGCCATCCATGTCTGAAGTTGTAGTCCTACTTAGTTGCAATGACTTACTTCAGCATATGAGACCTTCAATGCCTATTTTTATTGGATCAAATTCAAGGCTTCACAGAGTTATCTCTGCTTCAACTGGTTCCTCTACATCTAATGTTACTCCCTCCAATTCTATAGTACCTGTTCGATGA 1950 0.4205 MVQLKLVALTLLVLWSWWNFEGAVGDPQTLILKFECSVVSVHDSANFFQNLNASLANLKSQLVSNQSKHFVTAQSTTGTDPVYAMFQCRNYLSNTDCVTCFAVAAATVRNCSTMNTARAIYDGCILRYENNDFFKQNLISSIHTLCGNQTADESTGFGAVGRQVLMDLQIATPKISGYFAATKTQVEGGAIYAIGQCAETLTQDTCLDCLSAEQRDLQDCLPSTNGRGFDPPVCFMRYSATPFFADNQTIDITSFLKQGEEGSIKKWAIIGGGVVGALLVVILIPLLPRHSGSQSPKRVPRSTIMGATELKAPTKYKYSDLKAATKNFSEKNKLGEGGFGAVYKGTMKNGKIVAVKKLISGNSNQMDDEFESEVTVISNVHHRNLVRLLGCCSIGEERILVYEYMANTSLDKFIFGKRKGSLNWKQRYDIILGTARGLTYLHEEFHVSIIHRDIKSGNILLDEQLQPKISDFGLVKLLPGDKSHIRTRVAGTLGYTAPEYVLQGQLSEKADTYSYGIVVLEIISGQKSTDVKVDDDGDEEYLLRRAWKLHERGMLLELVDKSLDPNNYDAEEVKKVISIALLCTQASAAMRPSMSEVVVLLSCNDLLQHMRPSMPIFIGSNSRLHRVISASTGSSTSNVTPSNSIVPVR 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02086 649 ProSiteProfiles Gnk2-homologous domain profile. 139 243 IPR002902 -
Gma11g02086 649 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524
Gma11g02086 649 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 15 640 - -
Gma11g02086 649 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Gma11g02086 649 Gene3D - 29 133 IPR038408 -
Gma11g02086 649 Gene3D - 139 243 IPR038408 -
Gma11g02086 649 Pfam Protein kinase domain 328 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02086 649 CDD STKc_IRAK 334 598 - -
Gma11g02086 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Gma11g02086 649 ProSiteProfiles Protein kinase domain profile. 328 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02086 649 SUPERFAMILY Protein kinase-like (PK-like) 310 601 IPR011009 -
Gma11g02086 649 Gene3D Phosphorylase Kinase; domain 1 292 404 - -
Gma11g02086 649 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 640 - -
Gma11g02086 649 Gene3D Transferase(Phosphotransferase) domain 1 405 611 - -
Gma11g02086 649 SMART serkin_6 328 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02086 649 Pfam Salt stress response/antifungal 41 130 IPR002902 -
Gma11g02086 649 Pfam Salt stress response/antifungal 150 240 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02086 Gma-Chr11 34969840 34978174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02086 2 635 Receptor kinase-like Gene Family AT1G70520 36.476 1.54e-126 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma11g02086 Pkinase 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02086 - - gmx:100816764 1246.11