Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02085 ATGAAACTCGTAACCTTAACCTTGTTGATGTTGTGGTCATGGTGGAGCTTTGAGGGTGCAGTAGGAGACCCTCAAACTCTATTACTCAAACAGGATTGCAGCGGATTCACGGCACCCAACTTGTCCAACTTCAACCAAAATCTAAACGCAAGTTTGGCAGACCTGAGAGCAGAAGTGAGCAACCAAAGGAAGCACTTTGCCACTTCTCAATCAACCACCGGAACGAGTCCTGTCTATGCCATGATTCAATGCAGGAACTACCTCTCCAACACCGACTGCGCTGCCTGCCTCGCCGCCGCCGACGCCAAGATTCGCAACTGCTCCACCGGAGCTAACGGTGCCCGTGTCATTTACGACGGCTGCTTCCTCAGGTACGAGAGCAATGATTTCTTTGCCCAGATCATGCCTCGCAGCAGCATACTTTGTGGAAGTCAGAGTGCAGATGAAAGCACAGCTTTCAGTGAAGCTGGACAACAAGTACTAACGGATCTACAAATAGCAACACCAAAAATCACTGGCTACTATGCAGCTACCAAGACACAAGTGGCTGGTGGTGCAATCTATGCCATTGCACAATGTGCTGAAACTCTCACACAAGACAATTGTTTGGAATGTTTGTCAAATGAACAGACCACCGTACAAGGTTGTCTTCCCAATACAAATGGTAGGGCATTCGATGCAGGGTGCTTTATGAGATACTCAGAGACACCCTTCTTTTCTGATAACCAAACCATTGATATCGCTCCCTTCTTAAATCAAGGAGGACGTTCAACTAAGAAGTGGTTCATTATTGGTGGTGTTGTTGGGGGTTTAGTCCTTGTTGTGATCCTTCTTTTATCATTTTTAATTATAATTCCCGGGTGTAGAAGATCCCAAATTCCCAAAAGAGTTCCTAGAGGTAACATATTGGAAGGGACTCAGTTGAAAGGTCCAACCAAGTTTAAGTATAGTGACTTGAAAGCTGCAACGAAAAACTTTAGTGAGAAAAATAAACTAGGAGAAGGAGGCTTTGGAGCTGTATACAAGGGAACTATGAAAAATGGGAAAGTTGTTGCAGTGAAAAAATTAATTTCAGGAAATTCCAGCAAGATAGATGACGACTTTGAAAGTGAAGTAATGCTTATAAGTAATGTTCATCATAGAAATCTGGTTCAGCTTCTTGGTTGTTGCAGTAAAGGCCAAGATAGAATCCTTGTCTATGAATACATGGCAAACAACAGCCTCGACAAATTTTTATTTGGAAAAAGAAAAGGTTCCCTCAACTGGAAACAACGCTATGATATAATTTTGGGCACAGCACGGGGATTGACTTATCTACATGAGGAATTTCATGTTTCTATCATACATAGAGATATTAAGAGTGGCAATATCCTATTGGATGAACAACTTCAGCCCAAAATTTCTGATTTTGGGTTGGCGAAACTCCTACCAGAAGACCAATCTCATGTTCGCACAAGAGTTGCAGGAACATTGGGATACACAGCACCTGAGTATGTACTCCATGGTCAATTATCAGAAAAAGCTGATACATACAGCTATGGAATTGTAGCCTTAGAAATCATAAGTGGTCAAAAGAGTACTGATGTAAAAGTTGTTGATGACGATGGTGATGAAGAATATCTTCTTCGACGAGCATGGAAGTTGTATGAGAGAGGCATGCTTTTGGAGTTAGTAGACAAAAGCTTAGACCCAAATAACTATGATGCAGAAGAAGTGAAGAAAGTCATAGCCATTGCTTTGTTGTGCACTCAAGCATCGGCTGCAATGAGGCCAGCTATGTCTGAAGTAGTAGTCTTACTCAACTGCAATAACTTACTTGAGCATATGAGACCTTCAATGCCTATCTTTATTGAGTCGAATTTAAGGCCTCAGAGAGATATATTTGCGTCAACGGGTTCCTCTACATCTAATGCTACTACCTCCAATTCTATATAG 1935 0.4212 MKLVTLTLLMLWSWWSFEGAVGDPQTLLLKQDCSGFTAPNLSNFNQNLNASLADLRAEVSNQRKHFATSQSTTGTSPVYAMIQCRNYLSNTDCAACLAAADAKIRNCSTGANGARVIYDGCFLRYESNDFFAQIMPRSSILCGSQSADESTAFSEAGQQVLTDLQIATPKITGYYAATKTQVAGGAIYAIAQCAETLTQDNCLECLSNEQTTVQGCLPNTNGRAFDAGCFMRYSETPFFSDNQTIDIAPFLNQGGRSTKKWFIIGGVVGGLVLVVILLLSFLIIIPGCRRSQIPKRVPRGNILEGTQLKGPTKFKYSDLKAATKNFSEKNKLGEGGFGAVYKGTMKNGKVVAVKKLISGNSSKIDDDFESEVMLISNVHHRNLVQLLGCCSKGQDRILVYEYMANNSLDKFLFGKRKGSLNWKQRYDIILGTARGLTYLHEEFHVSIIHRDIKSGNILLDEQLQPKISDFGLAKLLPEDQSHVRTRVAGTLGYTAPEYVLHGQLSEKADTYSYGIVALEIISGQKSTDVKVVDDDGDEEYLLRRAWKLYERGMLLELVDKSLDPNNYDAEEVKKVIAIALLCTQASAAMRPAMSEVVVLLNCNNLLEHMRPSMPIFIESNLRPQRDIFASTGSSTSNATTSNSI 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02085 644 CDD STKc_IRAK 332 601 - -
Gma11g02085 644 Gene3D Phosphorylase Kinase; domain 1 301 402 - -
Gma11g02085 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Gma11g02085 644 ProSiteProfiles Gnk2-homologous domain profile. 26 130 IPR002902 -
Gma11g02085 644 ProSiteProfiles Gnk2-homologous domain profile. 135 238 IPR002902 -
Gma11g02085 644 Pfam Protein tyrosine and serine/threonine kinase 329 598 IPR001245 GO:0004672|GO:0006468
Gma11g02085 644 Coils Coil 45 65 - -
Gma11g02085 644 Pfam Salt stress response/antifungal 145 235 IPR002902 -
Gma11g02085 644 Pfam Salt stress response/antifungal 39 127 IPR002902 -
Gma11g02085 644 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 16 640 - -
Gma11g02085 644 Gene3D - 137 238 IPR038408 -
Gma11g02085 644 Gene3D - 25 130 IPR038408 -
Gma11g02085 644 SUPERFAMILY Protein kinase-like (PK-like) 310 623 IPR011009 -
Gma11g02085 644 SMART serkin_6 326 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02085 644 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 16 640 - -
Gma11g02085 644 ProSitePatterns Protein kinases ATP-binding region signature. 332 355 IPR017441 GO:0005524
Gma11g02085 644 Gene3D Transferase(Phosphotransferase) domain 1 403 610 - -
Gma11g02085 644 ProSiteProfiles Protein kinase domain profile. 326 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02085 Gma-Chr11 34952831 34967369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02085 6 643 Receptor kinase-like Gene Family AT1G70520 37.099 2.07e-128 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma11g02085 PK_Tyr_Ser-Thr 4.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02085 - - gmx:100815179 1111.67