Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02081 ATGTTCATCATCGAAGTCTCGTTAGACTTCTTAGTTTATGAATACATGGCAAATAGTAGCCTGGACAAGTTCTTATTTGGTGACAAAAAAGGTTCCCTCATCTGGAAACAAAGGTATGATATAATTTTAGGCACAACAAGGGGACTGGCCTATTTACATGAGAATTTTCATGTGTCCATCATACATAGAGATATTAAGACTGCTAATATCCTTCTAGATGATGATCTTCAGCCCAAAATAGCTGATTTTGGGTTGGCAAGGCTTCTTCCTGGAGATCGTTCTCATTCATGGAAACTGTATGAGAGAGGCTCTCACTTGCAGCTGTTGGAAGAGGACATAAACCCTAATGAATATGATGCAGAAGAAGTGAAGAAAATCATAGAAATTGCTTTACTATGCACTCAAGCATCAGCTGCAATGAGGCCAACAATGTCTGAAGTAGTATTGCTACTCAAAAGCAAGAGCTTAATGGAGCACCTGCAACCAACTATGCCTGTCGTTATTGGAACGAATACGATGCCTCGGGAAGGCAACTCTACTACTTCATCAAATGATATTGCCTCAATTTCTATTCCATCAGCCCGATGA 588 0.3997 MFIIEVSLDFLVYEYMANSSLDKFLFGDKKGSLIWKQRYDIILGTTRGLAYLHENFHVSIIHRDIKTANILLDDDLQPKIADFGLARLLPGDRSHSWKLYERGSHLQLLEEDINPNEYDAEEVKKIIEIALLCTQASAAMRPTMSEVVLLLKSKSLMEHLQPTMPVVIGTNTMPREGNSTTSSNDIASISIPSAR 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02081 195 Pfam Protein kinase domain 10 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02081 195 Gene3D Transferase(Phosphotransferase) domain 1 17 96 - -
Gma11g02081 195 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 95 188 - -
Gma11g02081 195 Coils Coil 194 195 - -
Gma11g02081 195 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02081 195 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 95 - -
Gma11g02081 195 SUPERFAMILY Protein kinase-like (PK-like) 10 177 IPR011009 -
Gma11g02081 195 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 95 188 - -
Gma11g02081 195 MobiDBLite consensus disorder prediction 168 195 - -
Gma11g02081 195 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 9 95 - -
Gma11g02081 195 SMART tyrkin_6 1 151 IPR020635 GO:0004713|GO:0006468
Gma11g02081 195 ProSitePatterns Serine/Threonine protein kinases active-site signature. 60 72 IPR008271 GO:0004672|GO:0006468
Gma11g02081 195 Gene3D Transferase(Phosphotransferase) domain 1 97 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02081 Gma-Chr11 34819328 34820837 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02081 2 191 Receptor kinase-like Gene Family AT4G04540 32.245 2.52e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma11g02081 Pkinase 3.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02081 - - vra:106775622 230.335