Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02038 ATGCATCTTTCAAAGAGTTTCAAGCATGGAGTTGTTTTCCTCTTGTGGTTCTGCTGCTATTTGCTGCATGCTGCTGGGCAGAATAACATCACTGATCCCGTTGAAGTTGACGCATTGAGAGCCATTAAGAGGCGTTTGATTGATCCTAATGGAAATTTGAGCAATTGGGAAGATAGAGACCCGTGTACATCAAGGTGGAAAGGAGTTTTGTGCTTCAATGAAACAAAAGAGGATGGCTATCTGCATGTTGAAGAATTGCAATTACTGAGATTGAACTTGTTCGGAACTTTGGCACCAGATCTTGGCAAATTAACTTATATGAAAAGATTGAACTTTATGTGGAACAACATAAGTGGGAGTATTCCAAAGGAAGTTGGCAATATCACATCTTTGGAACTCTTGCTTCTGAATGGAAATAACTTAACAGGATCACTACCAGAGGAGATTGGCTATCTTCCAAACCTGGATAGAATACAAATTGATCAGAACCAAATATCCGGACCTATACCTACGTCATTTGCAAACCTGAACAAGACAAAGCACTTCCACATGAACAATAATTCACTTAGTGGACAAATCCCACCGGAGCTTTCCCGATTACCAAAGCTTGTTCACCTTCTTCTCGACAACAACAACTTATCTGGATATCTTCCCCGTGAGCTGGCTGATATGCCAAGCTTACTTATCATTCAACTTGATAACAATAACTTTGAGGGAAATAGCATTCCTGATACATATGCCAACATGTCAAAGTTGTTGAAGATGAGCCTTAGGAATTGCAATTTGCGAGGACCACTTCCTGATTTAAGAAGGATACCTCACCTTCTTTATCTTGACCTCAGTTTCAACCAGTTGAATGGATCGATTCCTCCGAATAAGCTTTCTGAAAATATCACAACCATTGATTTATCAAACAACCTCCTTACTGGAAATATTCCATCCTACTTTGCTGATCTTCCACGTCTTCAGAAATTGTCACTTGCAAACAATTCATTGGATGGCACTGTTTCTTCCTCCATTTGGCAGAATAAGACTTTAAATGGAACAGAAAAATTTTTCTTGGAGTTGGAAAATAATAATCTTACAACCATATCAGGCAGTATTGATCTTCCTCCAAATGTCACAGTTGGGCTTAATGGAAATCCCCTTTGCTCAAATATAACCCTGATTCAGTTCTGTGGATCTGAAGCTGCTACTGTAACAAATGGCTCATTAACAACAAATTTCAGTTCCTGTCCCCCTCAAGGATGCCCTCCTCCTTTTGAATACACTGTGGATTGTTTCTGTGCGCTTCCATTGATTGTTTTCTATCGGTTGAAAAGTCCTGGATTTACAAACTTTCTTCCATATTTGAATGGATTTAAGGACTACATGACTCATGGTCTTGAAATATCTTTTGATCAGCTAGAATATGATTTTTATTGGCAAGTAGGACCTCGACTGAAAATGGATTTGAAGTTTTTTCCTCCATATCTTAATAACACTAGTAATCATACTTTCAATGAAAGCGAGCTCCTACGGATCAAAAGCAAGTTCACAGGATGGCTAATTCCAGACAATGATACGTTTGGGCCTTATGAACTGATTGGCTTCAATCTTTTGGGTTCTTACCAGGATGTGATTCCCACGAGATCTGAATCACAGAATATACGTACGGGTGTGCTGGTTGGCATAGTCATAGGGGCAATTGCCTGTGCAGTGACGTTATCTGCAATTGTTACCATTCTTATTTTGAGAATAAAATTGAGAGATTATCATGCCGTTTCCAAGCAACGTCATGCATCTAAAATCTCTATAAAAATTGATGGTGTAAGGGCCTTTACTTATGGAGAATTGTCCTTTGCCACAAACAATTTCAGCATCTCTGCTCAAGTTGGACAAGGGGGCTATGGGAAGGTTTATAAAGGGGTTCTTTCTGATGGCACAGTTGTTGCCATAAAACGTGCACAAGAGGGATCCCTGCAGGGTGAGAAGGAGTTCCTTACAGAAATATCATTACTATCAAGGTTACATCATCGCAACCTCGTGTCTCTGATTGGATACTGTGATGAAGAAGGTGAACAGATGCTGGTTTATGAATTTATGTCTAATGGCACATTGAGGGATCACCTTTCTGTTACAGCTAAAGATCCTCTGACTTTTgccatgagattgaagatcgcgctaggggcagctaaaggtcttatgtatctacacacagaagctgatcctccaatatttcaccgagatgtaaaggccagcaacatattattggactctaagtttTCCGCGAAAGTGGCTGATTTTGGACTCTCACGGCTTGCCCCAGTTCCAGACATGGAAGGAGTTGTGCCTGGTCATGTATCTACAGTGGTAAAGGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACTCATAAGTTGACTGACAAGAGTGATGTTTATAGTCTTGGTGTCGTATTTCTGGAACTTTTGACAGGGATGCATCCTATCTCACATGGCAAAAATATTGTTAGAGAGGTGAACGTTGCATACCAATCTGGCGTGATATTTTCAATTATCGATGGACGAATGGGGTCTTATCCATCTGAGCATGTGGAGAAATTTTTGACTTTGGCCATGAAGTGTTGCGAAGATGAGCCAGAGGCACGGCCTAGTATGACAGAAGTGGTAAGAGAGCTTGAGAACATATGGTCTACAATGCCGGAATCAGATACCAAGAGAGCTGAATTTATATCCAGTGATTCTGGCAAAGCAGACAGTCACAGTACACCATCTTCATCTTCTGCCTCTGCTTCTGTTATGAAGACTCCTTTTGTATCAGGAGATGTGTCAGGTAGTGACCTTGTTAGTGGAGTGATACCAAGCATCAAGCCAAGATAG 2865 0.3895 MHLSKSFKHGVVFLLWFCCYLLHAAGQNNITDPVEVDALRAIKRRLIDPNGNLSNWEDRDPCTSRWKGVLCFNETKEDGYLHVEELQLLRLNLFGTLAPDLGKLTYMKRLNFMWNNISGSIPKEVGNITSLELLLLNGNNLTGSLPEEIGYLPNLDRIQIDQNQISGPIPTSFANLNKTKHFHMNNNSLSGQIPPELSRLPKLVHLLLDNNNLSGYLPRELADMPSLLIIQLDNNNFEGNSIPDTYANMSKLLKMSLRNCNLRGPLPDLRRIPHLLYLDLSFNQLNGSIPPNKLSENITTIDLSNNLLTGNIPSYFADLPRLQKLSLANNSLDGTVSSSIWQNKTLNGTEKFFLELENNNLTTISGSIDLPPNVTVGLNGNPLCSNITLIQFCGSEAATVTNGSLTTNFSSCPPQGCPPPFEYTVDCFCALPLIVFYRLKSPGFTNFLPYLNGFKDYMTHGLEISFDQLEYDFYWQVGPRLKMDLKFFPPYLNNTSNHTFNESELLRIKSKFTGWLIPDNDTFGPYELIGFNLLGSYQDVIPTRSESQNIRTGVLVGIVIGAIACAVTLSAIVTILILRIKLRDYHAVSKQRHASKISIKIDGVRAFTYGELSFATNNFSISAQVGQGGYGKVYKGVLSDGTVVAIKRAQEGSLQGEKEFLTEISLLSRLHHRNLVSLIGYCDEEGEQMLVYEFMSNGTLRDHLSVTAKDPLTFAMRLKIALGAAKGLMYLHTEADPPIFHRDVKASNILLDSKFSAKVADFGLSRLAPVPDMEGVVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMHPISHGKNIVREVNVAYQSGVIFSIIDGRMGSYPSEHVEKFLTLAMKCCEDEPEARPSMTEVVRELENIWSTMPESDTKRAEFISSDSGKADSHSTPSSSSASASVMKTPFVSGDVSGSDLVSGVIPSIKPR 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02038 954 Gene3D Ribonuclease Inhibitor 34 186 IPR032675 -
Gma11g02038 954 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 11 924 - -
Gma11g02038 954 Gene3D Ribonuclease Inhibitor 295 394 IPR032675 -
Gma11g02038 954 SUPERFAMILY L domain-like 48 393 - -
Gma11g02038 954 MobiDBLite consensus disorder prediction 910 934 - -
Gma11g02038 954 Gene3D Phosphorylase Kinase; domain 1 588 694 - -
Gma11g02038 954 CDD STKc_IRAK 625 891 - -
Gma11g02038 954 Pfam Protein kinase domain 621 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02038 954 MobiDBLite consensus disorder prediction 900 954 - -
Gma11g02038 954 ProSiteProfiles Protein kinase domain profile. 619 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02038 954 SMART LRR_typ_2 224 248 IPR003591 -
Gma11g02038 954 SMART LRR_typ_2 200 223 IPR003591 -
Gma11g02038 954 SMART LRR_typ_2 319 343 IPR003591 -
Gma11g02038 954 SMART LRR_typ_2 272 296 IPR003591 -
Gma11g02038 954 SMART LRR_typ_2 128 152 IPR003591 -
Gma11g02038 954 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Gma11g02038 954 Gene3D Ribonuclease Inhibitor 187 294 IPR032675 -
Gma11g02038 954 SMART serkin_6 619 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02038 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 739 751 IPR008271 GO:0004672|GO:0006468
Gma11g02038 954 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Gma11g02038 954 ProSitePatterns Protein kinases ATP-binding region signature. 625 647 IPR017441 GO:0005524
Gma11g02038 954 Gene3D Transferase(Phosphotransferase) domain 1 695 913 - -
Gma11g02038 954 SUPERFAMILY Protein kinase-like (PK-like) 604 908 IPR011009 -
Gma11g02038 954 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 924 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02038 Gma-Chr11 34251216 34270142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02038 12 901 Receptor kinase-like Gene Family AT5G01950 57.364 0.0 984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gma11g02038 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02038 - - gmx:100799888 1874.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02038 11 34251216 34270142 Gma11g02038 11 34251216 34270142 ECH
Gma18g00473 18 4406939 4418249 Gma11g02038 11 34251216 34270142 GST
Gma11g02038 11 34251216 34270142 Gma14g02019 14 51217053 51228706 PCT
Gma14g02020 14 51231637 51250627 Gma11g02038 11 34251216 34270142 PCT