Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02033 ATGCTTCTGAACCTCTCCCATGCTTCCTTTCAGCAGGAAAATATGAAGGCCGGAAAAGTTTACTCCAAATTTAATTGTCGATATCTTATTCCTTTCAGTAAACAACTCTCCATGAAGTTCTGTTCTACTTCAGTGGCTTCTTTTCTTTTTGTCATAGTTATTTTTTTCCCTCTAGCTATTGCTGATCTAAGTTCAGATAAGCAAGCCCTTCTTAATTTTGCTAATGCTGTCCCCCACCGTCGAAACCTTATGTGGAATCCATCCACCTCAGTCTGTTCATCTTGGGTAGGCATCACTTGCAATGAAAATAGAACTCGTGTTGTTAAAGTCCGGCTCCCTGGAGTTGGACTAGTTGGCACCATCCCATCCAATACACTTGGCAAGCTTGATGCTGTGAAAATTATTAGCCTTCGCTCCAACCTACTCAGTGGAAATCTTCCTGCTGACATTGGTTCTCTTCCTTCTCTTCAGTATCTCTACCTCCAGCATAATAACCTTTCTGGTGATATACCTGCCTCATTGTCTCCCCAACTCATTGTACTTGATTTGTCATATAACTCCTTCACTGGTGTTATTCCGAAGACATTTCAAAATATGTCAGTATTAACTAGTTTGAATCTCCAGAACAACTCTCTATCCGGACAGATACCTAATCTTAATGTCACTCTGCTCAAGCTTTTGAATTTAAGCTACAACCATTTGAATGGCTCAATTCCCAAAGCTCTTGAGATTTTTCCAAATTCTTCCTTTGAAGGAAACTCTCTCTTATGTGGACCACCTTTAAAGCCATGCTCTGCAGTTCCCCCTACACCTTCTCCTGCCTCGACTCCGCCCCCATCAACTACTGGAAGACAAAGCTCAAAAAACAAGTTGAGTAAAATAGCTATCATTGTTATTGCTGTTGGAGGAGCTGTGGTGCTATTCTTTATTGCTCTTGTTTTTGTTATTTGCTGTTTAAAGAAGGAAGATAACAGAGGCTCCAATGTAATTAAAGGGAAAGGTCCTAGTGGTGGTAGGGGTGAGAAACCAAAAGAAGAGTTTGGAAGTGGGGTTCAAGAACCCGAGAAGAACAAGTTGGTTTTCTTTGAGGGAAGTTCTTATAATTTTGATCTTGAGGATTTGCTGAGAGCTTCGGCTGAAGTTCTGGGGAAGGGTAGTTATGGTACTGCATATAAGGCCATACTGGAGGAGTCAATGACTGTTGTGGTGAAAAGATTGAAAGAAGTTGTGGTAGGCAAGAAGGACTTTGAACAGCAGATGGAGATTATGGGAAGAGTTGGACAACACACAAATGTTGTGCCACTTCGCGCTTATTATTATTCAAAAGATGAAAAGCTTTTGGTATATGACTATGTCCCAGGTGGCAACCTACACACACTCTTGCATGGTGGTAGGACAGGTGGAAGAACTCCATTAGACTGGGACTCCCGAATAAAAATATCCCTTGGAACAGCCAAAGGTCTTGCCCACATTCATTCTGTTGGTGGTCCCAAATTCACACATGGAAATATCAAGTCCTCAAATGTCCTCCTCAACCAAGATAATGATGGCTGCATTTCTGATTTTGGCCTTGCGCCCCTTATGAATGTTCCTGCTACCCCTTCTAGAGCTGCAGGTTATCGTGCTCCTGAGGTGATTGAAACCCGTAAACACTCTCATAAATCAGATGTGTACAGTTTTGGTGTCCTCCTTCTTGAGATGCTTACCGGGAAGGCTCCTCTCCAATCTCCGGGACGTGATGATATGGTTGATCTCCCTAGGTGGGTTCAGTCTGTTGTTAGGGAAGAGTGGACGGCCGAAGTTTTTGACGTCGAGCTAATGAGGTACCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGCCATGGCTTGTGTGGCAAAGATGCCAGATATGAGACCTAGCATGGATGAAGCAGTGAGAATGATCGAAGAGATCCGGCAATCTGACTCAGAGAACCGACCATCTTCTGAAGAAAATAAATCTAAGGACTCAAATGTTCAGACTCCATAG 2016 0.4266 MLLNLSHASFQQENMKAGKVYSKFNCRYLIPFSKQLSMKFCSTSVASFLFVIVIFFPLAIADLSSDKQALLNFANAVPHRRNLMWNPSTSVCSSWVGITCNENRTRVVKVRLPGVGLVGTIPSNTLGKLDAVKIISLRSNLLSGNLPADIGSLPSLQYLYLQHNNLSGDIPASLSPQLIVLDLSYNSFTGVIPKTFQNMSVLTSLNLQNNSLSGQIPNLNVTLLKLLNLSYNHLNGSIPKALEIFPNSSFEGNSLLCGPPLKPCSAVPPTPSPASTPPPSTTGRQSSKNKLSKIAIIVIAVGGAVVLFFIALVFVICCLKKEDNRGSNVIKGKGPSGGRGEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESMTVVVKRLKEVVVGKKDFEQQMEIMGRVGQHTNVVPLRAYYYSKDEKLLVYDYVPGGNLHTLLHGGRTGGRTPLDWDSRIKISLGTAKGLAHIHSVGGPKFTHGNIKSSNVLLNQDNDGCISDFGLAPLMNVPATPSRAAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKMPDMRPSMDEAVRMIEEIRQSDSENRPSSEENKSKDSNVQTP 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02033 671 Pfam Protein kinase domain 379 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02033 671 SUPERFAMILY Protein kinase-like (PK-like) 380 654 IPR011009 -
Gma11g02033 671 MobiDBLite consensus disorder prediction 645 662 - -
Gma11g02033 671 MobiDBLite consensus disorder prediction 328 351 - -
Gma11g02033 671 Gene3D Ribonuclease Inhibitor 178 265 IPR032675 -
Gma11g02033 671 CDD STKc_IRAK 382 647 - -
Gma11g02033 671 Gene3D Phosphorylase Kinase; domain 1 344 451 - -
Gma11g02033 671 Pfam Leucine rich repeat 120 166 IPR001611 GO:0005515
Gma11g02033 671 Pfam Leucine rich repeat 176 212 IPR001611 GO:0005515
Gma11g02033 671 MobiDBLite consensus disorder prediction 266 286 - -
Gma11g02033 671 MobiDBLite consensus disorder prediction 645 671 - -
Gma11g02033 671 ProSitePatterns Protein kinases ATP-binding region signature. 382 413 IPR017441 GO:0005524
Gma11g02033 671 Gene3D Transferase(Phosphotransferase) domain 1 452 670 - -
Gma11g02033 671 ProSiteProfiles Protein kinase domain profile. 376 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g02033 671 Gene3D Ribonuclease Inhibitor 65 177 IPR032675 -
Gma11g02033 671 PANTHER OS05G0588300 PROTEIN 26 671 - -
Gma11g02033 671 Pfam Leucine rich repeat N-terminal domain 64 101 IPR013210 -
Gma11g02033 671 PANTHER LRR RECEPTOR-LIKE KINASE 26 671 - -
Gma11g02033 671 SUPERFAMILY L domain-like 65 264 - -
Gma11g02033 671 MobiDBLite consensus disorder prediction 337 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02033 Gma-Chr11 34110148 34114422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02033 32 669 Receptor kinase-like Gene Family AT5G58300 67.702 0.0 873
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma11g02033 Pkinase 2.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02033 - - gmx:100796171 1250.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02033 11 34110148 34114422 Gma11g02033 11 34110148 34114422 ECH
Gma18g00476 18 4463898 4467728 Gma11g02033 11 34110148 34114422 GST
Gma11g02033 11 34110148 34114422 Gma14g02017 14 51175805 51181028 PCT
Gma11g02033 11 34110148 34114422 Gma02g02236 02 48411474 48415266 PCT
Gma14g02017 14 51175805 51181028 Gma11g02033 11 34110148 34114422 PCT
Gma02g02236 02 48411474 48415266 Gma11g02033 11 34110148 34114422 PCT