Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02008 ATGGTTCTAGACTTATACGATGAAGACTACACAAAATTGGTGGACATATACTCATTTGGGATGTGTGTGTTAGAGCTGGTGACAGTAGAGATTCCTTATAGTGAATGTGACAATGTTGATAAGATATACAAAAAGGTGTCTTCTGGAGTTAGACCTACTGCCTTGAACAAGGTCAAAGatcctaagtTCTGGTTTCCACCGGGTAAGGGTTCTACTGTGGAGTATCGATTTGCATCTCGGTTGGGAAACTTTGATTTTGATGTGAACAGAAAAAGAATAAAGGCACTGAGACAAGAGTTGGAGAAGAAAGGATGGACATCTCAAGATACCATATGA 336 0.3869 MVLDLYDEDYTKLVDIYSFGMCVLELVTVEIPYSECDNVDKIYKKVSSGVRPTALNKVKDPKFWFPPGKGSTVEYRFASRLGNFDFDVNRKRIKALRQELEKKGWTSQDTI 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02008 111 Pfam Protein of unknown function (DUF1499) 56 100 IPR010865 -
Gma11g02008 111 SUPERFAMILY Protein kinase-like (PK-like) 7 62 IPR011009 -
Gma11g02008 111 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 1 62 - -
Gma11g02008 111 Gene3D Transferase(Phosphotransferase) domain 1 1 101 - -
Gma11g02008 111 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02008 Gma-Chr11 33444273 33445133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02008 1 62 MAP Kinase Kinase Kinase AT5G55560 69.355 1.36e-26 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gma11g02008 DUF1499 4.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02008 K08867 - gsj:114371631 118.627