Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02002 ATGGCCACACAGACGCAAGATCCACCTTCAAACCCTAACCCTAATCCCAATGCCACGTCGGCAACGCCATCTTCCTCCTTCTTCTTCCGCGCCGGCGGCGCCAACGGCGCCTCCGTCGCTCCAGTCGCCGGCTCCGGCGAGTCACACTCGCACCACCGTAGAGCGCAGTCGGAGGTCAGTTTCCGGCTGCCGGAAGACATGATGGACCTCTCGCCGTCCGATCCGTTCAACGGCGGATCCTCTACGGCGAGCTTCGAGGAGATCGGATCCGAGGACGACCTGTTCTCCACCTACATTGACGTCGAAAAGCTCAGCGGCGGCGCCAACGGCGCCGGCCGAGGCGGAAACGGATCGGATCAGAGCGGTTACGGAAACGGCGCCGGCACCAGCGGCCACAACGACGGCGAGAAGAGTTCGAGCGCCGCCGCAGCGCGGCCGAGACACCGGCACAGTAGCTCCGTCGACGGTTCCACGTCGACGTGCATGTTCGGAGAGATCATGGATGCGAAGAAAGCCATGCCTCCTGATAAGCTCGCGGAGCTTTGGAACATTGATCCAAAGCGTGCCAAAAGAATACTGGCTAATCGGCAATCTGCTGCGCGTTCAAAAGAAAGAAAGGCACGCTATATACAAGAACTTGAGCACAAAGTTCAGACCCTTCAGACTGAAGCTACAACACTATCTGCCCAACTTACATTGTACCAGAGGGATACAACTGGTCTGAGTTCTGAAAATACTGAGCTTAAGCTCCGTCTACAAGCCATGGAGCAACAAGCACAGCTTCGTGATGCTCTTAATGATGCATTGATGAAGGAAGTTGAGAGGCTTAAGATTGCTACCGGAGAGGCATTGAACCAATCCGAGTCTTTTAATCTGGGAATGCACCAGATGCCATATGCAGGGCCAAATTTCTTTTCAATTCCACCACATTCAGGTCCTTCTGGGCACCAGAACATGCAATTGCCACCATTTGGTCACTCCCAATCCACCGTGCCGACTCATCAGCTGCAACAAACAAATTCTCACCAAATGTCAGATATATTGCAAAACGACCAGCTTGGTCGTTTGCAGGGACTCGATATTAGTAGCAAAGGAACACCCATGGTGAAGTCTGAAGGCCCCTCAATATCTGCAAATGAGAGTAGCACCACATTTTGA 1158 0.5389 MATQTQDPPSNPNPNPNATSATPSSSFFFRAGGANGASVAPVAGSGESHSHHRRAQSEVSFRLPEDMMDLSPSDPFNGGSSTASFEEIGSEDDLFSTYIDVEKLSGGANGAGRGGNGSDQSGYGNGAGTSGHNDGEKSSSAAAARPRHRHSSSVDGSTSTCMFGEIMDAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYIQELEHKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRDALNDALMKEVERLKIATGEALNQSESFNLGMHQMPYAGPNFFSIPPHSGPSGHQNMQLPPFGHSQSTVPTHQLQQTNSHQMSDILQNDQLGRLQGLDISSKGTPMVKSEGPSISANESSTTF 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02002 385 MobiDBLite consensus disorder prediction 1 89 - -
Gma11g02002 385 MobiDBLite consensus disorder prediction 17 31 - -
Gma11g02002 385 MobiDBLite consensus disorder prediction 368 385 - -
Gma11g02002 385 MobiDBLite consensus disorder prediction 108 159 - -
Gma11g02002 385 SMART brlzneu 183 247 IPR004827 GO:0003700|GO:0006355
Gma11g02002 385 CDD bZIP_plant_RF2 188 237 IPR044759 GO:0003700|GO:0006355
Gma11g02002 385 SUPERFAMILY Leucine zipper domain 187 238 IPR046347 GO:0003700|GO:0006355
Gma11g02002 385 MobiDBLite consensus disorder prediction 114 137 - -
Gma11g02002 385 Gene3D - 186 239 - -
Gma11g02002 385 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 185 248 IPR004827 GO:0003700|GO:0006355
Gma11g02002 385 PANTHER BZIP TRANSCRIPTION FACTOR 1 382 - -
Gma11g02002 385 MobiDBLite consensus disorder prediction 308 342 - -
Gma11g02002 385 Coils Coil 203 230 - -
Gma11g02002 385 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 382 - -
Gma11g02002 385 MobiDBLite consensus disorder prediction 358 385 - -
Gma11g02002 385 Pfam bZIP transcription factor 187 245 IPR004827 GO:0003700|GO:0006355
Gma11g02002 385 MobiDBLite consensus disorder prediction 310 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02002 Gma-Chr11 33383794 33387129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g02002 9 385 bZIP Transcription Factor Family AT2G40620 50.369 1.77e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma11g02002 bZIP_1 2.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02002 - - gmx:100775607 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g02002 11 33383794 33387129 Gma11g02002 11 33383794 33387129 ECH
Gma18g00491 18 4587947 4591091 Gma11g02002 11 33383794 33387129 GST
Gma11g02002 11 33383794 33387129 Gma14g02004 14 50963391 50965817 PCT
Gma11g02002 11 33383794 33387129 Gma02g02228 02 48274167 48277096 PCT
Gma14g02004 14 50963391 50965817 Gma11g02002 11 33383794 33387129 PCT
Gma02g02228 02 48274167 48277096 Gma11g02002 11 33383794 33387129 PCT